BMRB Entry 6035

Name: 1H, 13C and 15N assignments for human DNA ligase III 1-117
Published: 2004-10-29

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR6035

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N assignments for human DNA ligase III 1-117

Deposition date:

2003-12-09

Original release date:

2004-10-29

Authors:

Kulczyk, Arkadiusz; Yang, Ji-Chun; Neuhaus, David

Citation:

Citation: Kulczyk, Arkadiusz; Yang, Ji-Chun; Neuhaus, David. "Solution structure and DNA binding of the zinc-finger domain from DNA ligase IIIalpha" J. Mol. Biol. 341, 723-738 (2004).
PubMed: 15288782

Assembly members:

Assembly members:
DNA ligase III zinc finger, polymer, 117 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
DNA ligase III zinc finger: MAEQRFCVDYAKRGTAGCKK CKEKIVKGVCRIGKVVPNPF SESGGDMKEWYHIKCMFEKL ERARATTKKIEDLTELEGWE ELEDNEKEQITQHIADLSSK AAGTPKKKAVVQAKLTT

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	564
13C chemical shifts	379
15N chemical shifts	108

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	DL3a 1-117	1
2	ZINC (II) ION	2

Entities:

Entity 1, DL3a 1-117 117 residues - Formula weight is not available

1

MET

ALA

GLU

GLN

ARG

PHE

CYS

VAL

ASP

TYR

2

ALA

LYS

ARG

GLY

THR

ALA

GLY

CYS

LYS

3

CYS

LYS

GLU

LYS

ILE

VAL

LYS

GLY

VAL

CYS

4

ARG

ILE

GLY

LYS

VAL

PRO

ASN

PRO

PHE

5

SER

GLU

SER

GLY

ASP

MET

LYS

GLU

TRP

6

TYR

HIS

ILE

LYS

CYS

MET

PHE

GLU

LYS

LEU

7

GLU

ARG

ALA

ARG

ALA

THR

LYS

ILE

8

GLU

ASP

LEU

THR

GLU

LEU

GLU

GLY

TRP

GLU

9

GLU

LEU

GLU

ASP

ASN

GLU

LYS

GLU

GLN

ILE

10

THR

GLN

HIS

ILE

ALA

ASP

LEU

SER

LYS

11

ALA

GLY

THR

PRO

LYS

ALA

VAL

12

VAL

GLN

ALA

LYS

LEU

THR

Entity 2, ZINC (II) ION - Zn - 65.409 Da.

1

ZN

PDB	1UW0
DBJ	BAE25421 BAE29732 BAE39460
EMBL	CAA59230
GB	AAA85022 AAC53003 AAC53004 AAH09026 AAH49240
REF	NP_001231032 NP_001252899 NP_001278174 NP_001278175 NP_001278176
SP	P49916 P97386
AlphaFold	P49916 P97386

BMRB Entry 6035

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

Name	Sample	Sample state	Sample conditions
2D 1H-1H NOESY	not available	not available	Ex-cond_1
2D 1H-1H TOCSY	not available	not available	Ex-cond_1
2D 1H-1H 2QF COSY	not available	not available	Ex-cond_1
2D 15N-1H HSQC	not available	not available	Ex-cond_1
2D 13C-1H HSQC	not available	not available	Ex-cond_1
3D CBCANH	not available	not available	Ex-cond_1
3D CBCA(CO)NH	not available	not available	Ex-cond_1
3D HBHANH	not available	not available	Ex-cond_1
3D HBHA(CO)NH	not available	not available	Ex-cond_1
3D HCCH-TOCSY	not available	not available	Ex-cond_1
3D HCCH-COSY	not available	not available	Ex-cond_1
3D 15N NOESY-HSQC	not available	not available	Ex-cond_1
3D 15N HSQC-NOESY-HSQC	not available	not available	Ex-cond_1
3D 13C NOESY-HSQC	not available	not available	Ex-cond_1