BMRB Entry 5866

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PDB ID: 1ppx
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR5866
MolProbity Validation Chart

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Title:
Solution Structure and NH Exchange Studies of the MutT Pyrophosphohydrolase Complexed with Mg(2+) and 8-oxo-dGMP, a Tightly-bound Product
Deposition date:
2003-07-14
Original release date:
2003-10-06
Authors:
Massiah, M.; Saraswat, V.; Azurmendi, H.; Mildvan, A.
Citation:

Citation: Massiah, M.; Saraswat, V.; Azurmendi, H.; Mildvan, A.. "Solution Structure and NH Exchange Studies of the MutT Pyrophosphohydrolase Complexed with Mg(2+) and 8-oxo-dGMP, a Tightly Bound Product "  Biochemistry 42, 10140-10154 (2003).
PubMed: 12939141

Assembly members:

Assembly members:
Mutator mutT protein, polymer, 129 residues, Formula weight is not available
8OG, non-polymer, 363.221 Da.
MG, non-polymer, 24.305 Da.

Natural source:

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Mutator mutT protein: MKKLQIAVGIIRNENNEIFI TRRAADAHMANKLEFPGGKI EMGETPEQAVVRELQEEVGI TPQHFSLFEKLEYEFPDRHI TLWFWLVERWEGEPWGKEGQ PGEWMSLVGLNADDFPPANE PVIAKLKRL

Data sets:
Data typeCount
1H chemical shifts822
13C chemical shifts282
15N chemical shifts122

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Mutator mutT protein1
28-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE2
3MAGNESIUM ION (II)3

Entities:

Entity 1, Mutator mutT protein 129 residues - Formula weight is not available

1   METLYSLYSLEUGLNILEALAVALGLYILE
2   ILEARGASNGLUASNASNGLUILEPHEILE
3   THRARGARGALAALAASPALAHISMETALA
4   ASNLYSLEUGLUPHEPROGLYGLYLYSILE
5   GLUMETGLYGLUTHRPROGLUGLNALAVAL
6   VALARGGLULEUGLNGLUGLUVALGLYILE
7   THRPROGLNHISPHESERLEUPHEGLULYS
8   LEUGLUTYRGLUPHEPROASPARGHISILE
9   THRLEUTRPPHETRPLEUVALGLUARGTRP
10   GLUGLYGLUPROTRPGLYLYSGLUGLYGLN
11   PROGLYGLUTRPMETSERLEUVALGLYLEU
12   ASNALAASPASPPHEPROPROALAASNGLU
13   PROVALILEALALYSLEULYSARGLEU

Entity 2, 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE - C10 H14 N5 O8 P - 363.221 Da.

1   8OG

Entity 3, MAGNESIUM ION (II) - Mg - 24.305 Da.

1   MG

Related Database Links:

PDB 1MUT 1PPX 1PUN 1PUQ 1PUS 1TUM 3A6S 3A6T 3A6U 3A6V
DBJ BAB33526 BAB96667 BAG75625 BAI23463 BAI28979
EMBL CAA28523 CAA38876 CAB41817 CAB41818 CAB41819
GB AAA24620 AAC73210 AAG54403 AAN41761 AAN78615
REF NP_285795 NP_308130 NP_414641 NP_706054 NP_752071
SP P08337
AlphaFold P08337

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