BMRB Entry 5589

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PDB ID: 1nxi
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR5589
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone and side chain 1H, 13C, and 15N chemical shift assignments for V. cholerae VC0424

Deposition date:

2002-11-14

Original release date:

2003-06-23

Authors:

Ramelot, Theresa; Cort, John; Ni, Shuisong; Kennedy, Michael

Citation:

Citation: Ramelot, Theresa; Ni, S.; Goldsmith-Fischman, S.; Cort, J.; Honig, B.; Kennedy, M.. "Solution structure of Vibrio cholorae protein VC0424: A variation of the Ferredoxin-like fold" Protein Sci. 12, 1562-1566 (2003).

Assembly members:

Assembly members:
VC0424, polymer, 132 residues, 15324 Da.

Natural source:

Natural source: Common Name: V. cholerae Taxonomy ID: 666 Superkingdom: Eubacteria Kingdom: not available Genus/species: Vibrio cholerae

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pet28b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
VC0424: MSHQDDYLSVEELIEIQKEE TRDIIQALLEDGSDPDALYE IEHHLFAEDFDKLEKAAVEA FKMGFEVLEAEETEDEDGNK LLCFDATMQSALDAKLIDEQ VEKLVNLAEKFDIIYDGWGT YYEGLEHHHHHH

Data sets:

assigned_chemical_shifts
- VC0424_shifts

Data type	Count
1H chemical shifts	863
13C chemical shifts	552
15N chemical shifts	130

Time Domain Data

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	VC0424	1

Entities:

Entity 1, VC0424 132 residues - 15324 Da.

1

MET

SER

HIS

GLN

ASP

TYR

LEU

SER

VAL

2

GLU

LEU

ILE

GLU

ILE

GLN

LYS

GLU

3

THR

ARG

ASP

ILE

GLN

ALA

LEU

GLU

4

ASP

GLY

SER

ASP

PRO

ASP

ALA

LEU

TYR

GLU

5

ILE

GLU

HIS

LEU

PHE

ALA

GLU

ASP

PHE

6

ASP

LYS

LEU

GLU

LYS

ALA

VAL

GLU

ALA

7

PHE

LYS

MET

GLY

PHE

GLU

VAL

LEU

GLU

ALA

8

GLU

THR

GLU

ASP

GLU

ASP

GLY

ASN

LYS

9

LEU

CYS

PHE

ASP

ALA

THR

MET

GLN

SER

10

ALA

LEU

ASP

ALA

LYS

LEU

ILE

ASP

GLU

GLN

11

VAL

GLU

LYS

LEU

VAL

ASN

LEU

ALA

GLU

LYS

12

PHE

ASP

ILE

TYR

ASP

GLY

TRP

GLY

THR

13

TYR

GLU

GLY

LEU

GLU

HIS

14

HIS

Name	Sample	Sample state	Sample conditions
1H-15N HSQC	sample_1	not available	cond_1
1H-13C HSQC (aliph, no CT)	sample_1	not available	cond_1
15N-edited NOESY-HQSC (80 ms)	sample_1	not available	cond_1
HCC-TOCSY-NNH	sample_1	not available	cond_1
HCCH-TOCSY	sample_1	not available	cond_1
13C-edited NOESY-HSQC (aliph)	sample_1	not available	cond_1
CBCACOCAHA	sample_1	not available	cond_1
HNCO	sample_1	not available	cond_1
HNCACB	sample_1	not available	cond_1
CBCA(CO)NH	sample_1	not available	cond_1
CC-TOCSY-NNH	sample_1	not available	cond_1
HNHA	sample_1	not available	cond_1
HNHB	sample_1	not available	cond_1
4D CC-NOESY	sample_1	not available	cond_1
1H-13C HSQC (aliph, CT)	sample_1	not available	cond_1
1H-13C HSQC (alpha, no CT)	sample_1	not available	cond_1
1H-13C HSQC (alpha, CT)	sample_1	not available	cond_1
1H-13C HSQC (arom, CT)	sample_1	not available	cond_1
13C-edited NOESY-HSQC (arom)	sample_1	not available	cond_1
15N-edited NOESY-HQSC (150 ms)	sample_1	not available	cond_1

PDB	1NXI
DBJ	BAP01933
GB	AAF93597 ABQ21042 ACP04735 ACP08488 ACQ59373
REF	NP_230078 WP_000019330 WP_000019331 WP_000019332 WP_000019333

BMRB Entry 5589

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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