BMRB Entry 5494

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PDB ID: 1m02
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5494
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR Structure of PW2 Bound to SDS Micelles: A Tryptophan-rich Anticocidial Peptide Selected from Phage Display Libraries

Deposition date:

2002-08-07

Original release date:

2002-08-22

Authors:

Tinoco, L.; da Silva, A.; Leite, A.; Valente, A.; Almeida, F.

Citation:

Citation: Tinoco, L.; da Silva, A.; Leite, A.; Valente, A.; Almeida, F.. "NMR Structure of PW2 bound to SDS Micelles. A Tryptophan-rich Anticocidial Peptide selected from Phage Display Libraries" J. Biol. Chem. 277, 36351-36356 (2002).
PubMed: 12130641

Assembly members:

Assembly members:
anticocidial peptide, polymer, 12 residues, 1611 Da.

Natural source:

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
anticocidial peptide: HPLKQYWWRPSI

Data sets:

assigned_chemical_shifts

Data type	Count
1H chemical shifts	266

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	cationic peptide	1

Entities:

Entity 1, cationic peptide 12 residues - 1611 Da.

1

HIS

PRO

LEU

LYS

GLN

TYR

TRP

ARG

PRO

2

SER

ILE

Samples:

PW2_1: anticocidial peptide 4.0 mM; sodium_phosphate_buffer 20.0 mM; sodium_chloride 100.0 mM; D2O 10%

PW2-40SDS: anticocidial peptide 4.0 mM; sodium_phosphate_buffer 20.0 mM; SDS 40.0 mM; sodium_chloride 100.0 mM

PW2-160SDS: anticocidial peptide 4.0 mM; sodium_phosphate_buffer 20.0 mM; sodium_chloride 100.0 mM; SDS 160.0 mM; D2O 10.0%

sample_conds: pH: 5.0; temperature: 298 K; ionic strength: 100 mM; pressure: 1 atm

Experiments:

Name	Sample	Sample state	Sample conditions
2D NOESY	not available	not available	sample_conds
2D TOCSY	not available	not available	sample_conds

Software:

NMRPipe - processing

NMRVIEW v4.1.2 - data analysis

CNS v1.1 - refinement

NMR spectrometers:

Bruker DRX 400 MHz