BMRB Entry 5341

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5341

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Title:
1H, 13C, and 15N backbone assignment of an extended N-terminal, DNA-binding domain construct of the replication initiation protein from a geminivirus
Deposition date:
2002-04-09
Original release date:
2002-11-04
Authors:
Campos-Olivas, Ramon; Louis, John; Gronenborn, Bruno; Gronenborn, Angela
Citation:

Citation: Campos-Olivas, Ramon; Louis, John; Clerot, D.; Gronenborn, Bruno; Gronenborn, Angela. "1H, 13C, and 15N assignment of the N-terminal, catalytic domain of the replication initiation protein from the geminivirus TYLCV"  J. Biomol. NMR 24, 73-74 (2002).

Assembly members:

Assembly members:
N-terminal DNA-binding domain of Rep protein from a geminivirus, polymer, 159 residues, 17922.92 Da.

Natural source:

Natural source:   Common Name: Tomato yellow leaf curl virus - Sardinia   Taxonomy ID: 123735   Superkingdom: Viruses   Kingdom: not available   Genus/species: Begomovirus Tomato yellow leaf curl virus - Sardinia

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
N-terminal DNA-binding domain of Rep protein from a geminivirus: MRGSHHHHHHGIPGSGSGDD DDKMPRSGRFSIKAKNYFLT YPKCDLTKENALSQITNLQT PTNKLFIKICRELHENGEPH LHILIQFEGKYNCTNQRFFD LVSPTRSAHFHPNIQGAKSS SDVKSYIDKDGDVLEWGTFQ IDGRSARGGQQTANDAYAK

Data sets:
Data typeCount
1H chemical shifts172
13C chemical shifts290
15N chemical shifts156

Additional metadata:

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  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1NTD-Rep, H6_rep1-1361

Entities:

Entity 1, NTD-Rep, H6_rep1-136 159 residues - 17922.92 Da.

1   METARGGLYSERHISHISHISHISHISHIS
2   GLYILEPROGLYSERGLYSERGLYASPASP
3   ASPASPLYSMETPROARGSERGLYARGPHE
4   SERILELYSALALYSASNTYRPHELEUTHR
5   TYRPROLYSCYSASPLEUTHRLYSGLUASN
6   ALALEUSERGLNILETHRASNLEUGLNTHR
7   PROTHRASNLYSLEUPHEILELYSILECYS
8   ARGGLULEUHISGLUASNGLYGLUPROHIS
9   LEUHISILELEUILEGLNPHEGLUGLYLYS
10   TYRASNCYSTHRASNGLNARGPHEPHEASP
11   LEUVALSERPROTHRARGSERALAHISPHE
12   HISPROASNILEGLNGLYALALYSSERSER
13   SERASPVALLYSSERTYRILEASPLYSASP
14   GLYASPVALLEUGLUTRPGLYTHRPHEGLN
15   ILEASPGLYARGSERALAARGGLYGLYGLN
16   GLNTHRALAASNASPALATYRALALYS

Related Database Links:

BMRB 5297
PDB 1L2M 1L5I
EMBL CAA43466
GB ACE02956 ACE02974 ADF43040 AFQ00071
REF NP_620741
SP P27260
AlphaFold P27260

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks