BMRB Entry 5291

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PDB ID: 1kz5
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5291
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Investigation of Penetratin Peptides. Part 1: The Environment Dependent Conformational Properties of Penetratin and two of its Derivatives

Deposition date:

2002-02-15

Original release date:

2002-03-29

Authors:

Czajlik, Andras; Mesko, Eszter; Penke, Botond; Perczel, Andras

Citation:

Citation: Czajlik, Andras; Mesko, Eszter; Penke, Botond; Perczel, Andras. "Investigation of Penetratin Peptides. Part 1: The Environment Dependent Conformational Properties of Penetratin and two of its Derivatives" J. Pept. Sci. 8, 151-171 (2002).
PubMed: 11991205

Assembly members:

Assembly members:
12 amino acid long derivative of the third helix of Antennapedia homeodomain, polymer, 12 residues, 1716 Da.

Natural source:

Natural source: Common Name: fruit fly Taxonomy ID: 7227 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Drosophila melanogaster

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
12 amino acid long derivative of the third helix of Antennapedia homeodomain: RQIKIWFRKWKK

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	119

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	penetratin 12	1

Entities:

Entity 1, penetratin 12 12 residues - 1716 Da.

1

ARG

GLN

ILE

LYS

ILE

TRP

PHE

ARG

LYS

TRP

2

LYS

Samples:

sample_1: 12 amino acid long derivative of the third helix of Antennapedia homeodomain 1.5 mM; trifluoroethanol 90%; water 10%

cond_set_1: pH: 3; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H DQF-COSY	not available	not available	not available
2D 1H-1H TOCSY	not available	not available	not available
2D 1H-1H NOESY	not available	not available	not available

Software:

FELIX v97.2 - peak assignment, peak picking, raw spectral data processing

NMR spectrometers:

Bruker DRX 500 MHz