BMRB Entry 50977

Name: Human obscurin Ig12
Published: 2022-10-24

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PDB ID: 7r68
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR50977
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Human obscurin Ig12

Deposition date:

2021-06-16

Original release date:

2022-10-24

Authors:

Mauriello, Gianna; Wright, Nathan

Citation:

Citation: Mauriello, Gianna; Moncure, Grace; Nowzari, Roujon; Miller, Callie; Wright, Nathan. "The N-terminus of obscurin is flexible in solution" Proteins 91, 485-496 (2023).
PubMed: 36306263

Assembly members:

Assembly members:
entity_1, polymer, 101 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET24a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: MKMMFAKEQSVHNEVQAEAG ASAMLSCEVAQAQTEVTWYK DGKKLSSSSKVGMEVKGCTR RLVLPQAGKADAGEYSCEAG GQRVSFHLHITEPLEHHHHH H

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	272
15N chemical shifts	85
1H chemical shifts	561

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Human obscurin Ig12	1

Entities:

Entity 1, Human obscurin Ig12 101 residues - Formula weight is not available

1

MET

LYS

MET

PHE

ALA

LYS

GLU

GLN

SER

2

VAL

HIS

ASN

GLU

VAL

GLN

ALA

GLU

ALA

GLY

3

ALA

SER

ALA

MET

LEU

SER

CYS

GLU

VAL

ALA

4

GLN

ALA

GLN

THR

GLU

VAL

THR

TRP

TYR

LYS

5

ASP

GLY

LYS

LEU

SER

LYS

6

VAL

GLY

MET

GLU

VAL

LYS

GLY

CYS

THR

ARG

7

ARG

LEU

VAL

LEU

PRO

GLN

ALA

GLY

LYS

ALA

8

ASP

ALA

GLY

GLU

TYR

SER

CYS

GLU

ALA

GLY

9

GLY

GLN

ARG

VAL

SER

PHE

HIS

LEU

HIS

ILE

10

THR

GLU

PRO

LEU

GLU

HIS

11

HIS

Samples:

sample_1: Human obscurin Ig12, [U-100% 15N], 1 mM; TRIS 50 mM; NaCl 20 mM; NaN3 0.35 mM

sample_conditions_1: ionic strength: 0.05 M; pH: 7.2; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
1H-15N heteronoe	sample_1	isotropic	sample_conditions_1
3D HCACO	sample_1	isotropic	sample_conditions_1

Software:

TOPSPIN - collection

SPARKY - chemical shift assignment

X-PLOR NIH - refinement

NMR spectrometers:

Bruker Avance 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks