BMRB Entry 4830

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR4830

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

The Hairpin Structure of the (6)F1(1)F2(2)F2 Fragment from Human Fibronectin Enhances Gelatin Binding

Deposition date:

2000-09-14

Original release date:

2001-08-01

Authors:

Pickford, Andrew; Smith, Steven; Staunton, David; Boyd, Jonathan; Campbell, Iain

Citation:

Citation: Pickford, Andrew; Smith, Steven; Staunton, David; Boyd, Jonathan; Campbell, Iain. "The Hairpin Structure of the (6)F1(1)F2(2)F2 Fragment from Human Fibronectin Enhances Gelatin Binding" EMBO J. 20, 1519-1529 (2001).
PubMed: 11285216

Assembly members:

Assembly members:
6f11f22f2, polymer, 160 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
6f11f22f2: YGHCVTDSGVVYSVGMQWLK TQGNKQMLCTCLGNGVSCQE TAVTQTYGGNSNGEPCVLPF TYNGRTFYSCTTEGRQDGHL WCSTTSNYEQDQKYSFCTDH TVLVQTRGGNSNGALCHFPF LYNNHNYTDCTSEGRRDNMK WCGTTQNYDADQKFGFCPMA

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	994
15N chemical shifts	165

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	6f11f22f2	1

Entities:

Entity 1, 6f11f22f2 160 residues - Formula weight is not available

1	TYR	GLY	HIS	CYS	VAL	THR	ASP	SER	GLY	VAL
2	VAL	TYR	SER	VAL	GLY	MET	GLN	TRP	LEU	LYS
3	THR	GLN	GLY	ASN	LYS	GLN	MET	LEU	CYS	THR
4	CYS	LEU	GLY	ASN	GLY	VAL	SER	CYS	GLN	GLU
5	THR	ALA	VAL	THR	GLN	THR	TYR	GLY	GLY	ASN
6	SER	ASN	GLY	GLU	PRO	CYS	VAL	LEU	PRO	PHE
7	THR	TYR	ASN	GLY	ARG	THR	PHE	TYR	SER	CYS
8	THR	THR	GLU	GLY	ARG	GLN	ASP	GLY	HIS	LEU
9	TRP	CYS	SER	THR	THR	SER	ASN	TYR	GLU	GLN
10	ASP	GLN	LYS	TYR	SER	PHE	CYS	THR	ASP	HIS
11	THR	VAL	LEU	VAL	GLN	THR	ARG	GLY	GLY	ASN
12	SER	ASN	GLY	ALA	LEU	CYS	HIS	PHE	PRO	PHE
13	LEU	TYR	ASN	ASN	HIS	ASN	TYR	THR	ASP	CYS
14	THR	SER	GLU	GLY	ARG	ARG	ASP	ASN	MET	LYS
15	TRP	CYS	GLY	THR	THR	GLN	ASN	TYR	ASP	ALA
16	ASP	GLN	LYS	PHE	GLY	PHE	CYS	PRO	MET	ALA

Name	Sample	Sample state	Sample conditions
2D DQF-COSY	sample_1	not available	Ex-cond_1
2D TOCSY	sample_1	not available	Ex-cond_1
2D NOESY (60ms mixing time)	sample_1	not available	Ex-cond_1
3D [1H-15N]	sample_1	not available	Ex-cond_1
TOCSY	sample_1	not available	Ex-cond_1
3D [1H-15N] NOESY (60ms mixing time)	sample_1	not available	Ex-cond_1

GenBank	AAD00015
PDB	1E8B 1E88

BMRB Entry 4830

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	TYR	GLY	HIS	CYS	VAL	THR	ASP	SER	GLY	VAL
2	VAL	TYR	SER	VAL	GLY	MET	GLN	TRP	LEU	LYS
3	THR	GLN	GLY	ASN	LYS	GLN	MET	LEU	CYS	THR
4	CYS	LEU	GLY	ASN	GLY	VAL	SER	CYS	GLN	GLU
5	THR	ALA	VAL	THR	GLN	THR	TYR	GLY	GLY	ASN
6	SER	ASN	GLY	GLU	PRO	CYS	VAL	LEU	PRO	PHE
7	THR	TYR	ASN	GLY	ARG	THR	PHE	TYR	SER	CYS
8	THR	THR	GLU	GLY	ARG	GLN	ASP	GLY	HIS	LEU
9	TRP	CYS	SER	THR	THR	SER	ASN	TYR	GLU	GLN
10	ASP	GLN	LYS	TYR	SER	PHE	CYS	THR	ASP	HIS
11	THR	VAL	LEU	VAL	GLN	THR	ARG	GLY	GLY	ASN
12	SER	ASN	GLY	ALA	LEU	CYS	HIS	PHE	PRO	PHE
13	LEU	TYR	ASN	ASN	HIS	ASN	TYR	THR	ASP	CYS
14	THR	SER	GLU	GLY	ARG	ARG	ASP	ASN	MET	LYS
15	TRP	CYS	GLY	THR	THR	GLN	ASN	TYR	ASP	ALA
16	ASP	GLN	LYS	PHE	GLY	PHE	CYS	PRO	MET	ALA

1	TYR	GLY	HIS	CYS	VAL	THR	ASP	SER	GLY	VAL
2	VAL	TYR	SER	VAL	GLY	MET	GLN	TRP	LEU	LYS
3	THR	GLN	GLY	ASN	LYS	GLN	MET	LEU	CYS	THR
4	CYS	LEU	GLY	ASN	GLY	VAL	SER	CYS	GLN	GLU
5	THR	ALA	VAL	THR	GLN	THR	TYR	GLY	GLY	ASN
6	SER	ASN	GLY	GLU	PRO	CYS	VAL	LEU	PRO	PHE
7	THR	TYR	ASN	GLY	ARG	THR	PHE	TYR	SER	CYS
8	THR	THR	GLU	GLY	ARG	GLN	ASP	GLY	HIS	LEU
9	TRP	CYS	SER	THR	THR	SER	ASN	TYR	GLU	GLN
10	ASP	GLN	LYS	TYR	SER	PHE	CYS	THR	ASP	HIS
11	THR	VAL	LEU	VAL	GLN	THR	ARG	GLY	GLY	ASN
12	SER	ASN	GLY	ALA	LEU	CYS	HIS	PHE	PRO	PHE
13	LEU	TYR	ASN	ASN	HIS	ASN	TYR	THR	ASP	CYS
14	THR	SER	GLU	GLY	ARG	ARG	ASP	ASN	MET	LYS
15	TRP	CYS	GLY	THR	THR	GLN	ASN	TYR	ASP	ALA
16	ASP	GLN	LYS	PHE	GLY	PHE	CYS	PRO	MET	ALA

1	TYR	GLY	HIS	CYS	VAL	THR	ASP	SER	GLY	VAL
2	VAL	TYR	SER	VAL	GLY	MET	GLN	TRP	LEU	LYS
3	THR	GLN	GLY	ASN	LYS	GLN	MET	LEU	CYS	THR
4	CYS	LEU	GLY	ASN	GLY	VAL	SER	CYS	GLN	GLU
5	THR	ALA	VAL	THR	GLN	THR	TYR	GLY	GLY	ASN
6	SER	ASN	GLY	GLU	PRO	CYS	VAL	LEU	PRO	PHE
7	THR	TYR	ASN	GLY	ARG	THR	PHE	TYR	SER	CYS
8	THR	THR	GLU	GLY	ARG	GLN	ASP	GLY	HIS	LEU
9	TRP	CYS	SER	THR	THR	SER	ASN	TYR	GLU	GLN
10	ASP	GLN	LYS	TYR	SER	PHE	CYS	THR	ASP	HIS
11	THR	VAL	LEU	VAL	GLN	THR	ARG	GLY	GLY	ASN
12	SER	ASN	GLY	ALA	LEU	CYS	HIS	PHE	PRO	PHE
13	LEU	TYR	ASN	ASN	HIS	ASN	TYR	THR	ASP	CYS
14	THR	SER	GLU	GLY	ARG	ARG	ASP	ASN	MET	LYS
15	TRP	CYS	GLY	THR	THR	GLN	ASN	TYR	ASP	ALA
16	ASP	GLN	LYS	PHE	GLY	PHE	CYS	PRO	MET	ALA