BMRB Entry 4623

Name: Internal xylan binding domain from C. fimi Xyn10A, R262G mutant
Published: 2001-02-15

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PDB ID: 1e5c
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4623
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Internal xylan binding domain from C. fimi Xyn10A, R262G mutant

Deposition date:

2000-07-14

Original release date:

2001-02-15

Authors:

Simpson, P.; Hefang, X.; Bolam, D.; Gilbert, H.; Williamson, M.

Citation:

Citation: Simpson, P.; Xie, H.; Bolam, D.; Gilbert, H.; Williamson, M.. "The Structural Basis for the Ligand Specificity of Family 2 Carbohydrate-binding Modules" J. Biol. Chem. 275, 41137-41142 (2000).
PubMed: 10973978

Assembly members:

Assembly members:
XYLANASE D, polymer, 87 residues, Formula weight is not available

Natural source:

Natural source: Common Name: not available Taxonomy ID: 1708 Superkingdom: Bacteria Kingdom: not available Genus/species: Cellulomonas fimi

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
XYLANASE D: TGCSVTATRAEEWSDGFNVT YSVSGSSAWTVNLALNGSQT IQASWNANVTGSGSTRTVTP NGSGNTFGVTVMKNGSSTTP AATCAGS

Data sets:

assigned_chemical_shifts
- chem_shift_set_1

Data type	Count
15N chemical shifts	97
1H chemical shifts	517

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Xyn10A	1

Entities:

Entity 1, Xyn10A 87 residues - Formula weight is not available

1

THR

GLY

CYS

SER

VAL

THR

ALA

THR

ARG

ALA

2

GLU

TRP

SER

ASP

GLY

PHE

ASN

VAL

THR

3

TYR

SER

VAL

SER

GLY

SER

ALA

TRP

THR

4

VAL

ASN

LEU

ALA

LEU

ASN

GLY

SER

GLN

THR

5

ILE

GLN

ALA

SER

TRP

ASN

ALA

ASN

VAL

THR

6

GLY

SER

GLY

SER

THR

ARG

THR

VAL

THR

PRO

7

ASN

GLY

SER

GLY

ASN

THR

PHE

GLY

VAL

THR

8

VAL

MET

LYS

ASN

GLY

SER

THR

PRO

9

ALA

THR

CYS

ALA

GLY

SER

Samples:

sample_1: XYLANASE D, [U-15N], 1.5 mM

sample_cond_1: pH: 5.0; temperature: 310 K

Experiments:

Name	Sample	Sample state	Sample conditions
TOCSY	sample_1	not available	sample_cond_1
DQF-COSY	sample_1	not available	sample_cond_1
NOESY	sample_1	not available	sample_cond_1
E.COSY	sample_1	not available	sample_cond_1
HSQC	sample_1	not available	sample_cond_1
NOESY-HMQC	sample_1	not available	sample_cond_1
TOCSY-HMQC	sample_1	not available	sample_cond_1
HNHA	sample_1	not available	sample_cond_1
HNHB	sample_1	not available	sample_cond_1

Software:

No software information available

NMR spectrometers:

Bruker DRX 500 MHz
Bruker DRX 600 MHz
Bruker DRX 750 MHz