BMRB Entry 4573

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4573

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1HN,15N,13CO,13Ca,13Cb chemical shifts of 7,8-dihydroneopterin aldolase (DHNA) from Staphylococcus aureus

Deposition date:

2000-01-25

Original release date:

2004-05-15

Authors:

Salzmann, Michael; Pervushin, Konstantin; Wider, Gerhard; Senn, Hans; Wuthrich, Kurt

Citation:

Citation: Salzmann, Michael; Pervushin, Konstantin; Wider, Gerhard; Senn, Hans; Wuthrich, Kurt. "NMR Assignment and Secondary Structure Determination of an Octameric 110 kDa Protein Using TROSY in Triple Resonance Experiments" J. Am. Chem. Soc. 122, 7543-7548 (2000).

Assembly members:

Assembly members:
Aldolase, polymer, 121 residues, 15000 Da.

Natural source:

Natural source: Common Name: Staphylococcus aureus Taxonomy ID: 1280 Superkingdom: Bacteria Kingdom: not available Genus/species: Staphylococcus aureus

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Aldolase: MQDTIFLKGMRFYGYHGALS AENEIGQIFKVDVTLKVDLS EAGRTDNVIDTVHYGEVFEE VKSIMEGKAVNLLEHLAERI ANRINSQYNRVMETKVRITK ENPPIPGHYDGVGIEIVREN K

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_label

Data type	Count
1H chemical shifts	109
13C chemical shifts	302
15N chemical shifts	109

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	subunit-1	1
2	subunit-2	1
3	subunit-3	1
4	subunit-4	1
5	subunit-5	1
6	subunit-6	1
7	subunit-7	1
8	subunit-8	1

Entities:

Entity 1, subunit-1 121 residues - 15000 Da.

1

MET

GLN

ASP

THR

ILE

PHE

LEU

LYS

GLY

MET

2

ARG

PHE

TYR

GLY

TYR

HIS

GLY

ALA

LEU

SER

3

ALA

GLU

ASN

GLU

ILE

GLY

GLN

ILE

PHE

LYS

4

VAL

ASP

VAL

THR

LEU

LYS

VAL

ASP

LEU

SER

5

GLU

ALA

GLY

ARG

THR

ASP

ASN

VAL

ILE

ASP

6

THR

VAL

HIS

TYR

GLY

GLU

VAL

PHE

GLU

7

VAL

LYS

SER

ILE

MET

GLU

GLY

LYS

ALA

VAL

8

ASN

LEU

GLU

HIS

LEU

ALA

GLU

ARG

ILE

9

ALA

ASN

ARG

ILE

ASN

SER

GLN

TYR

ASN

ARG

10

VAL

MET

GLU

THR

LYS

VAL

ARG

ILE

THR

LYS

11

GLU

ASN

PRO

ILE

PRO

GLY

HIS

TYR

ASP

12

GLY

VAL

GLY

ILE

GLU

ILE

VAL

ARG

GLU

ASN

13

LYS

Samples:

sample_label: Aldolase, [U-95% 2H; U-98% 13C; U-99% 15N], 0.5 mM

sample_conditions_label: pH: 6.5; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

XEASY -

NMR spectrometers:

Bruker DRX 750 MHz

PDB	1DHN 1RRI 1RRW 1RRY 1RS2 1RS4 1RSD 1RSI 1U68 2DHN 2NM2 2NM3
DBJ	BAB41703 BAB56677 BAB94335 BAF66749 BAF77395
EMBL	CAG39538 CAG42247 CAI80152 CAQ49018 CBI48462
GB	AAW37671 ABD20664 ABD29643 ABQ48341 ABR51408
REF	WP_001154300 WP_001154301 WP_001154302 WP_001154303 WP_001154304
SP	P56740 P64145 P64146 P64147 Q5HIG0
AlphaFold	P56740 P64145 P64146 P64147 Q5HIG0