BMRB Entry 4558

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4558

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Title:
1H, 13C, and 15N Assignments for YopH-NT
Deposition date:
1999-12-12
Original release date:
2001-06-26
Authors:
Khandelwal, P.; Keliikuli, Kai; Smit, C.; Saper, M.; Zuiderweg, Erik
Citation:

Citation: Khandelwal, P.; Keliikuli, Kai; Smit, C.; Saper, M.; Zuiderweg, Erik. "Letter to the editor: 1H, 15N and 13C Assignments of the N-terminal Domain of Yersinia outer Protein H in its apo form and in Complex with a Phosphotyrosine Peptide"  J. Biomol. NMR 21, 69-70 (2001).
PubMed: 11693571

Assembly members:

Assembly members:
YopH N-terminal domain, polymer, 136 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: 633   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: Yersinia pseudotuberculosis

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YopH N-terminal domain: MNLSLSDLHRQVSRLVQQES GDCTGKLRGNVAANKETTFQ GLTIASGARESEKVFAQTVL SHVANVVLTQEDTAKLLQST VKHNLNNYDLRSVGNGNSVL VSLRSDQMTLQDAKVLLEAA LRQESGARGSHHHHHH

Data sets:
Data typeCount
1H chemical shifts526
13C chemical shifts432
15N chemical shifts123

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1YopH-NT1

Entities:

Entity 1, YopH-NT 136 residues - Formula weight is not available

1   METASNLEUSERLEUSERASPLEUHISARG
2   GLNVALSERARGLEUVALGLNGLNGLUSER
3   GLYASPCYSTHRGLYLYSLEUARGGLYASN
4   VALALAALAASNLYSGLUTHRTHRPHEGLN
5   GLYLEUTHRILEALASERGLYALAARGGLU
6   SERGLULYSVALPHEALAGLNTHRVALLEU
7   SERHISVALALAASNVALVALLEUTHRGLN
8   GLUASPTHRALALYSLEULEUGLNSERTHR
9   VALLYSHISASNLEUASNASNTYRASPLEU
10   ARGSERVALGLYASNGLYASNSERVALLEU
11   VALSERLEUARGSERASPGLNMETTHRLEU
12   GLNASPALALYSVALLEULEUGLUALAALA
13   LEUARGGLNGLUSERGLYALAARGGLYSER
14   HISHISHISHISHISHIS

Samples:

sample_1: YopH N-terminal domain, [U-90% 2H; U-13C; U-15N], 0.8 mM

sample_2: YopH N-terminal domain, [U-13C; U-15N], mM

sample_conditions_set_1: pH: 6.5; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
HNCAnot availablenot availablesample_conditions_set_1
HNCOCAnot availablenot availablesample_conditions_set_1
HNCOnot availablenot availablesample_conditions_set_1
HN(CA)COnot availablenot availablesample_conditions_set_1
HNCACBnot availablenot availablesample_conditions_set_1
CBCACONHnot availablenot availablesample_conditions_set_1
HCCH-TOCSYnot availablenot availablesample_conditions_set_1

Software:

No software information available

NMR spectrometers:

  • Varian . 800 MHz
  • Bruker . 600 MHz
  • Bruker . 500 MHz

Related Database Links:

PDB
EMBL CNJ69380
GB KJG82311

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks