BMRB Entry 4457

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4457

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Title:
Sequence-specific assignments and partial unfolding of extracellular domains II and III of E-cadherin.
Deposition date:
1999-11-15
Original release date:
2000-03-17
Authors:
Alattia, Jean-Rene; Tong, Frances; Tong, Kit; Ikura, Mitsuhiko
Citation:

Citation: Alattia, Jean-Rene; Tong, Frances; Tong, Kit; Ikura, Mitsuhiko. "Letter to the Editor: Sequence-specific resonance assignments and partial unfolding of extracellular domains II and III of E-cadherin"  J. Biomol. NMR 16, 181-182 (2000).

Assembly members:

Assembly members:
Epithelial Cadherin, polymer, 227 residues, 24355 Da.

Natural source:

Natural source:   Common Name: Mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET 15b (modified)

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Epithelial Cadherin: GSMTQEVFEGSVAEGAVPGT SVMKVSATDADDDVNTYNAA IAYTIVSQDPELPHKNMFTV NRDTGVISVLTSGLDRESYP TYTLVVQAADLQGEGLSTTA KAVITVKDINDNAPVFNPST YQGQVPENEVNARIATLKVT DDDAPNTPAWKAVYTVVNDP DQQFVVVTDPTTNDGILKTA KGLDFEAKQQYILHVRVENE EPFEGSLVPSTATVTVDVVD VNEAPIF

Data sets:
Data typeCount
1H chemical shifts332
13C chemical shifts321
15N chemical shifts167

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1E-cadherin domains 2-31

Entities:

Entity 1, E-cadherin domains 2-3 227 residues - 24355 Da.

1   GLYSERMETTHRGLNGLUVALPHEGLUGLY
2   SERVALALAGLUGLYALAVALPROGLYTHR
3   SERVALMETLYSVALSERALATHRASPALA
4   ASPASPASPVALASNTHRTYRASNALAALA
5   ILEALATYRTHRILEVALSERGLNASPPRO
6   GLULEUPROHISLYSASNMETPHETHRVAL
7   ASNARGASPTHRGLYVALILESERVALLEU
8   THRSERGLYLEUASPARGGLUSERTYRPRO
9   THRTYRTHRLEUVALVALGLNALAALAASP
10   LEUGLNGLYGLUGLYLEUSERTHRTHRALA
11   LYSALAVALILETHRVALLYSASPILEASN
12   ASPASNALAPROVALPHEASNPROSERTHR
13   TYRGLNGLYGLNVALPROGLUASNGLUVAL
14   ASNALAARGILEALATHRLEULYSVALTHR
15   ASPASPASPALAPROASNTHRPROALATRP
16   LYSALAVALTYRTHRVALVALASNASPPRO
17   ASPGLNGLNPHEVALVALVALTHRASPPRO
18   THRTHRASNASPGLYILELEULYSTHRALA
19   LYSGLYLEUASPPHEGLUALALYSGLNGLN
20   TYRILELEUHISVALARGVALGLUASNGLU
21   GLUPROPHEGLUGLYSERLEUVALPROSER
22   THRALATHRVALTHRVALASPVALVALASP
23   VALASNGLUALAPROILEPHE

Related Database Links:

REF NP_033994.1
SWISS-PROT P09803
GenBank EDL11373.1 AAH98501.1 EDL11372.1
PRF 1312359A
EMBL CAA29488.1 CAA43292.1 CAA29645.1
PDB 1EDH

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks