BMRB Entry 4360

Name: 1H, 13C and 15N Chemical Shift Assignments for the C2B-domain of Rabphilin 3
Published: 1999-09-10

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4360

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N Chemical Shift Assignments for the C2B-domain of Rabphilin 3

Deposition date:

1999-06-18

Original release date:

1999-09-10

Authors:

Ubach, Josep; Garcia, Jesus; Nittler, M. Paige; Sudhof, Thomas; Rizo, Josep

Citation:

Citation: Ubach, Josep; Garcia, Jesus; Nittler, M. Paige; Sudhof, Thomas; Rizo, Josep. "Structure of the Janus-faced C2B Domain of Rabphilin" Nature Cell Biol. 1, 106-112 (1999).

Assembly members:

Assembly members:
rabphilin_3_C2B, polymer, 140 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Norway rat Taxonomy ID: 10116 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rattus norvegicus

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
rabphilin_3_C2B: RGKILVSLMYSTQQGGLIVG IIRCVHLAAMDANGYSDPFV KLWLKPDMGKKAKHKTQIKK KTLNPEFNEEFFYDIKHSDL AKKSLDISVWDYDIGKSNDY IGGCQLGISAKGERLKHWYE CLKNKDKKIERWHQLQNENH

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_one

Data type	Count
13C chemical shifts	561
15N chemical shifts	153
1H chemical shifts	1022

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	rabphilin_3_C2B	1

Entities:

Entity 1, rabphilin_3_C2B 140 residues - Formula weight is not available

1	ARG	GLY	LYS	ILE	LEU	VAL	SER	LEU	MET	TYR
2	SER	THR	GLN	GLN	GLY	GLY	LEU	ILE	VAL	GLY
3	ILE	ILE	ARG	CYS	VAL	HIS	LEU	ALA	ALA	MET
4	ASP	ALA	ASN	GLY	TYR	SER	ASP	PRO	PHE	VAL
5	LYS	LEU	TRP	LEU	LYS	PRO	ASP	MET	GLY	LYS
6	LYS	ALA	LYS	HIS	LYS	THR	GLN	ILE	LYS	LYS
7	LYS	THR	LEU	ASN	PRO	GLU	PHE	ASN	GLU	GLU
8	PHE	PHE	TYR	ASP	ILE	LYS	HIS	SER	ASP	LEU
9	ALA	LYS	LYS	SER	LEU	ASP	ILE	SER	VAL	TRP
10	ASP	TYR	ASP	ILE	GLY	LYS	SER	ASN	ASP	TYR
11	ILE	GLY	GLY	CYS	GLN	LEU	GLY	ILE	SER	ALA
12	LYS	GLY	GLU	ARG	LEU	LYS	HIS	TRP	TYR	GLU
13	CYS	LEU	LYS	ASN	LYS	ASP	LYS	LYS	ILE	GLU
14	ARG	TRP	HIS	GLN	LEU	GLN	ASN	GLU	ASN	HIS

Name	Sample	Sample state	Sample conditions
2D 1H-1H DQF-COSY	sample_one	not available	sample_conditions_one
2D 1H-1H NOESY	sample_one	not available	sample_conditions_one
2D 1H-1H TOCSY	sample_one	not available	sample_conditions_one
2D 1H-15N HSQC	sample_one	not available	sample_conditions_one
HNCO	sample_one	not available	sample_conditions_one
1H-15N NOESY-HSQC	sample_one	not available	sample_conditions_one
1H-15N TOCSY-HSQC	sample_one	not available	sample_conditions_one
HNCACB	sample_one	not available	sample_conditions_one
(H)CBCACO(CA)HA	sample_one	not available	sample_conditions_one
(H)C(CO)NH-TOCSY	sample_one	not available	sample_conditions_one
H(C)(CO)NH-TOCSY	sample_one	not available	sample_conditions_one
HCCH-TOCSY	sample_one	not available	sample_conditions_one
HNHA	sample_one	not available	sample_conditions_one

PDB	2CM5 2CM6 3RPB
GB	EPQ01947
REF	XP_003907251

BMRB Entry 4360

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	ARG	GLY	LYS	ILE	LEU	VAL	SER	LEU	MET	TYR
2	SER	THR	GLN	GLN	GLY	GLY	LEU	ILE	VAL	GLY
3	ILE	ILE	ARG	CYS	VAL	HIS	LEU	ALA	ALA	MET
4	ASP	ALA	ASN	GLY	TYR	SER	ASP	PRO	PHE	VAL
5	LYS	LEU	TRP	LEU	LYS	PRO	ASP	MET	GLY	LYS
6	LYS	ALA	LYS	HIS	LYS	THR	GLN	ILE	LYS	LYS
7	LYS	THR	LEU	ASN	PRO	GLU	PHE	ASN	GLU	GLU
8	PHE	PHE	TYR	ASP	ILE	LYS	HIS	SER	ASP	LEU
9	ALA	LYS	LYS	SER	LEU	ASP	ILE	SER	VAL	TRP
10	ASP	TYR	ASP	ILE	GLY	LYS	SER	ASN	ASP	TYR
11	ILE	GLY	GLY	CYS	GLN	LEU	GLY	ILE	SER	ALA
12	LYS	GLY	GLU	ARG	LEU	LYS	HIS	TRP	TYR	GLU
13	CYS	LEU	LYS	ASN	LYS	ASP	LYS	LYS	ILE	GLU
14	ARG	TRP	HIS	GLN	LEU	GLN	ASN	GLU	ASN	HIS

1	ARG	GLY	LYS	ILE	LEU	VAL	SER	LEU	MET	TYR
2	SER	THR	GLN	GLN	GLY	GLY	LEU	ILE	VAL	GLY
3	ILE	ILE	ARG	CYS	VAL	HIS	LEU	ALA	ALA	MET
4	ASP	ALA	ASN	GLY	TYR	SER	ASP	PRO	PHE	VAL
5	LYS	LEU	TRP	LEU	LYS	PRO	ASP	MET	GLY	LYS
6	LYS	ALA	LYS	HIS	LYS	THR	GLN	ILE	LYS	LYS
7	LYS	THR	LEU	ASN	PRO	GLU	PHE	ASN	GLU	GLU
8	PHE	PHE	TYR	ASP	ILE	LYS	HIS	SER	ASP	LEU
9	ALA	LYS	LYS	SER	LEU	ASP	ILE	SER	VAL	TRP
10	ASP	TYR	ASP	ILE	GLY	LYS	SER	ASN	ASP	TYR
11	ILE	GLY	GLY	CYS	GLN	LEU	GLY	ILE	SER	ALA
12	LYS	GLY	GLU	ARG	LEU	LYS	HIS	TRP	TYR	GLU
13	CYS	LEU	LYS	ASN	LYS	ASP	LYS	LYS	ILE	GLU
14	ARG	TRP	HIS	GLN	LEU	GLN	ASN	GLU	ASN	HIS

1	ARG	GLY	LYS	ILE	LEU	VAL	SER	LEU	MET	TYR
2	SER	THR	GLN	GLN	GLY	GLY	LEU	ILE	VAL	GLY
3	ILE	ILE	ARG	CYS	VAL	HIS	LEU	ALA	ALA	MET
4	ASP	ALA	ASN	GLY	TYR	SER	ASP	PRO	PHE	VAL
5	LYS	LEU	TRP	LEU	LYS	PRO	ASP	MET	GLY	LYS
6	LYS	ALA	LYS	HIS	LYS	THR	GLN	ILE	LYS	LYS
7	LYS	THR	LEU	ASN	PRO	GLU	PHE	ASN	GLU	GLU
8	PHE	PHE	TYR	ASP	ILE	LYS	HIS	SER	ASP	LEU
9	ALA	LYS	LYS	SER	LEU	ASP	ILE	SER	VAL	TRP
10	ASP	TYR	ASP	ILE	GLY	LYS	SER	ASN	ASP	TYR
11	ILE	GLY	GLY	CYS	GLN	LEU	GLY	ILE	SER	ALA
12	LYS	GLY	GLU	ARG	LEU	LYS	HIS	TRP	TYR	GLU
13	CYS	LEU	LYS	ASN	LYS	ASP	LYS	LYS	ILE	GLU
14	ARG	TRP	HIS	GLN	LEU	GLN	ASN	GLU	ASN	HIS