BMRB Entry 4345

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4345

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, and 15N Chemical Shift Assignments for Yeast Ribosomal Protein L30 in Complex with Its mRNA in Solution

Deposition date:

1999-05-07

Original release date:

2000-03-08

Authors:

Mao, Hongyuan; White, Susan; Williamson, james

Citation:

Citation: Mao, Hongyuan; White, Susan; Williamson, james. "A Novel Loop-loop Recognition Motif in the Yeast Ribosomal Protein L30 Autoregulatory RNA Complex" Nat. Struct. Biol. 6, 1139-1147 (1999).

Assembly members:

Assembly members:
YEAST (SACCHAROMYCES CEREVISIAE) RIBOSOMAL PROTEIN L30, polymer, 104 residues, 11284 Da.
L30N, polymer, 33 residues, 10814 Da.

Natural source:

Natural source: Common Name: BAKER'S YEAST Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: SACCHAROMYCES CEREVISIAE

Experimental source:

Experimental source: Production method: recombinant technology Host organism: ESCHERICHIA COLI Vector: PMALC-L30

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YEAST (SACCHAROMYCES CEREVISIAE) RIBOSOMAL PROTEIN L30: APVKSQESINQKLALVIKSG KYTLGYKSTVKSLRQGKSKL IIIAANTPVLRKSELEYYAM LSKTKVYYFQGGNNELGTAV GKLFRVGVVSILEAGDSDIL TTLA
L30N: GGACCGGAGUGUCGCAAGAC GCAGAGAUGGUCC

Data sets:

assigned_chemical_shifts
- SHIFT_SET_1
- SHIFT_SET_2

Data type	Count
13C chemical shifts	648
15N chemical shifts	138
1H chemical shifts	1009

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	L30 PROTEIN	1
2	L30 MRNA	2

Entities:

Entity 1, L30 PROTEIN 104 residues - 11284 Da.

1

ALA

PRO

VAL

LYS

SER

GLN

GLU

SER

ILE

ASN

2

GLN

LYS

LEU

ALA

LEU

VAL

ILE

LYS

SER

GLY

3

LYS

TYR

THR

LEU

GLY

TYR

LYS

SER

THR

VAL

4

LYS

SER

LEU

ARG

GLN

GLY

LYS

SER

LYS

LEU

5

ILE

ALA

ASN

THR

PRO

VAL

LEU

6

ARG

LYS

SER

GLU

LEU

GLU

TYR

ALA

MET

7

LEU

SER

LYS

THR

LYS

VAL

TYR

PHE

GLN

8

GLY

ASN

GLU

LEU

GLY

THR

ALA

VAL

9

GLY

LYS

LEU

PHE

ARG

VAL

GLY

VAL

SER

10

ILE

LEU

GLU

ALA

GLY

ASP

SER

ASP

ILE

LEU

11

THR

LEU

ALA

Entity 2, L30 MRNA 33 residues - 10814 Da.

1

G

A

C

G

A

G

U

2

G

U

C

G

C

A

G

A

C

3

G

C

A

G

A

G

A

U

G

4

U

C

BMRB	4339
PDB	1CK2 1CN7 1NMU 1T0K 1VW8 1VWU 1VXV 1VXY 3IZS 3J65 3JYW 3O58 3O5H 3U5E 3U5I 4B6A 4BYN 4BYU 4CUW 4UJH 4UJJ 4UJM 4UJO 4UJR 4UJT 4UJW 4UJY 4UK1 4UK3 4UK6 4UK8 4UKB 4UKE 4UKH 4UKJ 4UKM 4UKO 4UKR 4UKT 4UKW 4UKY 4UL1 4UL3 4UL6 4UL8 4ULB 4ULD 4ULG 4ULI 4ULM 4ULO 4ULR 4ULT
DBJ	GAA23357
EMBL	CAA96731 CAY79728 CCD24685 CEP64155
GB	AAA35005 AHY79340 AJP38758 AJR76078 AJR76578
REF	NP_011485 XP_003669928
SP	P14120
TPG	DAA08069
AlphaFold	P14120

BMRB Entry 4345

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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