BMRB Entry 4325

Name: Characterization of Monomeric and Dimeric B-domain of Staphylococcal Protein A.
Published: 1999-09-13

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4325

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Characterization of Monomeric and Dimeric B-domain of Staphylococcal Protein A.

Deposition date:

1999-03-22

Original release date:

1999-09-13

Authors:

Karimi, Afshin; Matsumura, Masazumi; Wright, Peter; Dyson, H.

Citation:

Citation: Karimi, Afshin; Matsumura, Masazumi; Wright, Peter; Dyson, H.. "Characterization of Monomeric and Dimeric B-domain of Staphylococcal Protein A." J. Pept. Res. 54, 344-352 (1999).

Assembly members:

Assembly members:
dimer of B domain of protein A, polymer, 123 residues, 13000 Da.

Natural source:

Natural source: Common Name: golden staph. Taxonomy ID: 1280 Superkingdom: Eubacteria Kingdom: not available Genus/species: Staphylococcus aureus

Experimental source:

Experimental source: Production method: vendor

Entity Sequences (FASTA):

Entity Sequences (FASTA):
dimer of B domain of protein A: MADNKFNKEQQNAFYEILHL PNLNEEQRNGFIQSLKDDPS QSANLLAEAKKLNDAQAPKA DNKFNKEQQNAFYEILHLPN LNEEQRNGFIQSLKDDPSQS ANLLAEAKKLNDAQAPKADN KGS

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	845

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	dimeric B domain of protein A one	1
2	dimeric B domain of protein A two	1

Entities:

Entity 1, dimeric B domain of protein A one 123 residues - 13000 Da.

1

MET

ALA

ASP

ASN

LYS

PHE

ASN

LYS

GLU

GLN

2

GLN

ASN

ALA

PHE

TYR

GLU

ILE

LEU

HIS

LEU

3

PRO

ASN

LEU

ASN

GLU

GLN

ARG

ASN

GLY

4

PHE

ILE

GLN

SER

LEU

LYS

ASP

PRO

SER

5

GLN

SER

ALA

ASN

LEU

ALA

GLU

ALA

LYS

6

LYS

LEU

ASN

ASP

ALA

GLN

ALA

PRO

LYS

ALA

7

ASP

ASN

LYS

PHE

ASN

LYS

GLU

GLN

ASN

8

ALA

PHE

TYR

GLU

ILE

LEU

HIS

LEU

PRO

ASN

9

LEU

ASN

GLU

GLN

ARG

ASN

GLY

PHE

ILE

10

GLN

SER

LEU

LYS

ASP

PRO

SER

GLN

SER

11

ALA

ASN

LEU

ALA

GLU

ALA

LYS

LEU

12

ASN

ASP

ALA

GLN

ALA

PRO

LYS

ALA

ASP

ASN

13

LYS

GLY

SER

Samples:

sample_1: dimer of B domain of protein A1.0 – 4.0 mM

cond-1: pH: 5.0; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
1H 2QF COSY	not available	not available	not available
1H NOESY	not available	not available	not available
1H TOCSY	not available	not available	not available

Software:

No software information available

NMR spectrometers:

Bruker AMX 500 MHz
Bruker AMX 600 MHz

PDB	4NPF
EMBL	CUD36484
GB	ACL54840 EHS72728 EIK36223 EUN97074 EUO28860
REF	WP_031792806 WP_031794720 WP_033863190 WP_049280869 WP_049307830