BMRB Entry 4323

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4323

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, 15N NMR backbone assignments of 37 kDa surface antigen OspC from Borrelia burgdorferi

Deposition date:

1999-03-22

Original release date:

2000-12-15

Authors:

Huang, Xiaolin; Link, Karl; Koide, Akiko; Dunn, J.; Luft, B.; Koide, Shohei

Citation:

Citation: Huang, Xiaolin; Link, Karl; Koide, Akiko; Dunn, J.; Luft, B.; Koide, Shohei. "1H, 13C, 15N NMR backbone assignments of 37 kDa surface antigen OspC from Borrelia burgdorferi" J. Biomol. NMR 14, 283-284 (1999).

Assembly members:

Assembly members:
outer surface protein C, polymer, 174 residues, Formula weight is not available

Natural source:

Natural source: Common Name: spirochete Taxonomy ID: 139 Superkingdom: Eubacteria Kingdom: not available Genus/species: Borrelia burgdorferi

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET24-OspC

Entity Sequences (FASTA):

Entity Sequences (FASTA):
outer surface protein C: MKGPNLTEISKKITDSNAVL LAVKEVEALLSSIDEIAAKA IGKKIHQNNGLDTENNHNGS LLAGAYAISTLIKQKLDGLK NEGLKEKIDAAKKCSETFTN KLKEKHTDLGKEGVTDADAK EAILKTNGTKTKGAEELGKL FESVEVLSKAAKEMLANSVK ELTSPVVAESPKKP

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_one

Data type	Count
13C chemical shifts	495
15N chemical shifts	168
1H chemical shifts	168

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	OspC monomer 1	1
2	OspC monomer 2	1

Entities:

Entity 1, OspC monomer 1 174 residues - Formula weight is not available

1

MET

LYS

GLY

PRO

ASN

LEU

THR

GLU

ILE

SER

2

LYS

ILE

THR

ASP

SER

ASN

ALA

VAL

LEU

3

LEU

ALA

VAL

LYS

GLU

VAL

GLU

ALA

LEU

4

SER

ILE

ASP

GLU

ILE

ALA

LYS

ALA

5

ILE

GLY

LYS

ILE

HIS

GLN

ASN

GLY

6

LEU

ASP

THR

GLU

ASN

HIS

ASN

GLY

SER

7

LEU

ALA

GLY

ALA

TYR

ALA

ILE

SER

THR

8

LEU

ILE

LYS

GLN

LYS

LEU

ASP

GLY

LEU

LYS

9

ASN

GLU

GLY

LEU

LYS

GLU

LYS

ILE

ASP

ALA

10

ALA

LYS

CYS

SER

GLU

THR

PHE

THR

ASN

11

LYS

LEU

LYS

GLU

LYS

HIS

THR

ASP

LEU

GLY

12

LYS

GLU

GLY

VAL

THR

ASP

ALA

ASP

ALA

LYS

13

GLU

ALA

ILE

LEU

LYS

THR

ASN

GLY

THR

LYS

14

THR

LYS

GLY

ALA

GLU

LEU

GLY

LYS

LEU

15

PHE

GLU

SER

VAL

GLU

VAL

LEU

SER

LYS

ALA

16

ALA

LYS

GLU

MET

LEU

ALA

ASN

SER

VAL

LYS

17

GLU

LEU

THR

SER

PRO

VAL

ALA

GLU

SER

18

PRO

LYS

PRO

Samples:

sample_one: outer surface protein C, [U-99% 13C; U-98% 15N; U-95% 2H], 1.0 mM; sodium phosphate 20 mM; sodium chloride 100 mM; EDTA 0.10 mM; DTT 1.0 mM

sample_conditions_one: ionic strength: 120 mM; pH: 6.0; pressure: 1.0 atm; temperature: 308 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

PDB	1GGQ
DBJ	BAA08457
EMBL	CAA49306 CAA52001 CAA59254 CAG44432 CAG44433
GB	AAA16058 AAB06569 AAB36995 AAB81889 AAB81894
PRF	2003376B
REF	NP_047005 WP_010890595
SP	Q07337
AlphaFold	Q07337