BMRB Entry 4112

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4112

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Sequence-specific 1H Assignment and Secondary Structure of the Bacteriocin AS-48 Cyclic Peptide.

Deposition date:

1998-02-24

Original release date:

1999-02-02

Authors:

Langdon, Grant; Bruix, Marta; Galvez, Antonio; Valdivia, Eva; Maqueda, Mercedes; Rico, Manuel

Citation:

Citation: Langdon, Grant; Bruix, Marta; Galvez, Antonio; Valdivia, Eva; Maqueda, Mercedes; Rico, Manuel. "Sequence-specific 1H Assignment and Secondary Structure of the Bacteriocin AS-48 Cyclic Peptide." J. Biomol. NMR 12, 173-175 (1998).

Assembly members:

Assembly members:
Bacteriocin AS-48, polymer, 70 residues, 7149 Da.

Natural source:

Natural source: Common Name: enterococcus Taxonomy ID: 1351 Superkingdom: Eubacteria Kingdom: not available Genus/species: Enterococcus faecalis

Experimental source:

Experimental source: Production method: purified from the natural source

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Bacteriocin AS-48: MAKEFGIPAAVAGTVLNVVE AGGWVTTIVSILTAVGSGGL SLLAAAGRESIKAYLKKEIK KKGKRAVIAW

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_one

Data type	Count
1H chemical shifts	511

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	bacteriocin_cAS48	1

Entities:

Entity 1, bacteriocin_cAS48 70 residues - 7149 Da.

1	MET	ALA	LYS	GLU	PHE	GLY	ILE	PRO	ALA	ALA
2	VAL	ALA	GLY	THR	VAL	LEU	ASN	VAL	VAL	GLU
3	ALA	GLY	GLY	TRP	VAL	THR	THR	ILE	VAL	SER
4	ILE	LEU	THR	ALA	VAL	GLY	SER	GLY	GLY	LEU
5	SER	LEU	LEU	ALA	ALA	ALA	GLY	ARG	GLU	SER
6	ILE	LYS	ALA	TYR	LEU	LYS	LYS	GLU	ILE	LYS
7	LYS	LYS	GLY	LYS	ARG	ALA	VAL	ILE	ALA	TRP

Samples:

sample_one: Bacteriocin AS-48 1.5 mM; NaCl 0.1 M

sample_conditions_one: ionic strength: 0.1 M; pH: 3.0; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

PDB	1E68 1O82 1O83 1O84 4RGD
DBJ	BAA24805
EMBL	CAA56076 CAA72917
GB	AGQ55496 AHL69645 AKU62176 EOJ79470
REF	WP_010824081 WP_032489109 YP_009074455 YP_009075264 YP_009091579