BMRB Entry 4049

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4049

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of the Amino-Terminal Fragment of Urokinase-Type Plasminogen Activator

Deposition date:

1997-02-26

Original release date:

1999-08-24

Authors:

Hansen, Andrew; Petros, Andrew; Meadows, Robert; Nettesheim, David; Mazar, Andrew; Olejniczak, Edward; Xu, Robert; Pederson, Terry; Henkin, Jack; Fesik, Stephen

Citation:

Citation: Hansen, Andrew; Petros, Andrew; Meadows, Robert; Nettesheim, David; Mazar, Andrew; Olejniczak, Edward; Xu, Robert; Pederson, Terry; Henkin, Jack; Fesik, Stephen. "Solution Structure of the Amino-Terminal Fragment of Urokinase-Type Plasminogen Activator" Biochemistry 33, 4847-4864 (1994).

Assembly members:

Assembly members:
u-PA amino-terminal fragment, polymer, 130 residues, Formula weight is not available
BETA-D-FUCOSE, non-polymer, 164.156 Da.

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
u-PA amino-terminal fragment: QVPSNCDCLNGGTCVSNKYF SNIHWCNCPKKFGGQHCEID KSKTCYEGNGHFYRGKASTD TMGRPCLPWNSATVLQQTYH AHRSDALQLGLGKHNYCRNP DNRRRPWCYVQVGLKPLVQE CMVHDCADGK

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_one

Data type	Count
13C chemical shifts	398
15N chemical shifts	122
1H chemical shifts	822

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ATF	1

Entities:

Entity 1, ATF 130 residues - Formula weight is not available

1	GLN	VAL	PRO	SER	ASN	CYS	ASP	CYS	LEU	ASN
2	GLY	GLY	THR	CYS	VAL	SER	ASN	LYS	TYR	PHE
3	SER	ASN	ILE	HIS	TRP	CYS	ASN	CYS	PRO	LYS
4	LYS	PHE	GLY	GLY	GLN	HIS	CYS	GLU	ILE	ASP
5	LYS	SER	LYS	THR	CYS	TYR	GLU	GLY	ASN	GLY
6	HIS	PHE	TYR	ARG	GLY	LYS	ALA	SER	THR	ASP
7	THR	MET	GLY	ARG	PRO	CYS	LEU	PRO	TRP	ASN
8	SER	ALA	THR	VAL	LEU	GLN	GLN	THR	TYR	HIS
9	ALA	HIS	ARG	SER	ASP	ALA	LEU	GLN	LEU	GLY
10	LEU	GLY	LYS	HIS	ASN	TYR	CYS	ARG	ASN	PRO
11	ASP	ASN	ARG	ARG	ARG	PRO	TRP	CYS	TYR	VAL
12	GLN	VAL	GLY	LEU	LYS	PRO	LEU	VAL	GLN	GLU
13	CYS	MET	VAL	HIS	ASP	CYS	ALA	ASP	GLY	LYS

PDB	1KDU 1URK 2FD6 2I9A 2I9B 3BT1 3BT2 3U73 4K24
DBJ	BAA00175 BAA01919 BAG35799 BAG60256 BAG60754
EMBL	CAA26268 CAA26535 CAA38215 CAH89628
GB	AAA61252 AAA61253 AAA73054 AAC97138 AAH13575
PRF	1110198A 1111206A 1111261A 1404232A
REF	NP_001124729 NP_001138503 NP_002649 XP_003271314 XP_003312680
SP	P00749 Q5RF29
AlphaFold	P00749 Q5RF29

BMRB Entry 4049

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLN	VAL	PRO	SER	ASN	CYS	ASP	CYS	LEU	ASN
2	GLY	GLY	THR	CYS	VAL	SER	ASN	LYS	TYR	PHE
3	SER	ASN	ILE	HIS	TRP	CYS	ASN	CYS	PRO	LYS
4	LYS	PHE	GLY	GLY	GLN	HIS	CYS	GLU	ILE	ASP
5	LYS	SER	LYS	THR	CYS	TYR	GLU	GLY	ASN	GLY
6	HIS	PHE	TYR	ARG	GLY	LYS	ALA	SER	THR	ASP
7	THR	MET	GLY	ARG	PRO	CYS	LEU	PRO	TRP	ASN
8	SER	ALA	THR	VAL	LEU	GLN	GLN	THR	TYR	HIS
9	ALA	HIS	ARG	SER	ASP	ALA	LEU	GLN	LEU	GLY
10	LEU	GLY	LYS	HIS	ASN	TYR	CYS	ARG	ASN	PRO
11	ASP	ASN	ARG	ARG	ARG	PRO	TRP	CYS	TYR	VAL
12	GLN	VAL	GLY	LEU	LYS	PRO	LEU	VAL	GLN	GLU
13	CYS	MET	VAL	HIS	ASP	CYS	ALA	ASP	GLY	LYS

1	GLN	VAL	PRO	SER	ASN	CYS	ASP	CYS	LEU	ASN
2	GLY	GLY	THR	CYS	VAL	SER	ASN	LYS	TYR	PHE
3	SER	ASN	ILE	HIS	TRP	CYS	ASN	CYS	PRO	LYS
4	LYS	PHE	GLY	GLY	GLN	HIS	CYS	GLU	ILE	ASP
5	LYS	SER	LYS	THR	CYS	TYR	GLU	GLY	ASN	GLY
6	HIS	PHE	TYR	ARG	GLY	LYS	ALA	SER	THR	ASP
7	THR	MET	GLY	ARG	PRO	CYS	LEU	PRO	TRP	ASN
8	SER	ALA	THR	VAL	LEU	GLN	GLN	THR	TYR	HIS
9	ALA	HIS	ARG	SER	ASP	ALA	LEU	GLN	LEU	GLY
10	LEU	GLY	LYS	HIS	ASN	TYR	CYS	ARG	ASN	PRO
11	ASP	ASN	ARG	ARG	ARG	PRO	TRP	CYS	TYR	VAL
12	GLN	VAL	GLY	LEU	LYS	PRO	LEU	VAL	GLN	GLU
13	CYS	MET	VAL	HIS	ASP	CYS	ALA	ASP	GLY	LYS

1	GLN	VAL	PRO	SER	ASN	CYS	ASP	CYS	LEU	ASN
2	GLY	GLY	THR	CYS	VAL	SER	ASN	LYS	TYR	PHE
3	SER	ASN	ILE	HIS	TRP	CYS	ASN	CYS	PRO	LYS
4	LYS	PHE	GLY	GLY	GLN	HIS	CYS	GLU	ILE	ASP
5	LYS	SER	LYS	THR	CYS	TYR	GLU	GLY	ASN	GLY
6	HIS	PHE	TYR	ARG	GLY	LYS	ALA	SER	THR	ASP
7	THR	MET	GLY	ARG	PRO	CYS	LEU	PRO	TRP	ASN
8	SER	ALA	THR	VAL	LEU	GLN	GLN	THR	TYR	HIS
9	ALA	HIS	ARG	SER	ASP	ALA	LEU	GLN	LEU	GLY
10	LEU	GLY	LYS	HIS	ASN	TYR	CYS	ARG	ASN	PRO
11	ASP	ASN	ARG	ARG	ARG	PRO	TRP	CYS	TYR	VAL
12	GLN	VAL	GLY	LEU	LYS	PRO	LEU	VAL	GLN	GLU
13	CYS	MET	VAL	HIS	ASP	CYS	ALA	ASP	GLY	LYS