BMRB Entry 30155

Name: NMR solution structure of the RRM1 domain of the post-transcriptional regulator HuR
Published: 2017-08-04

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PDB ID: 5szw
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR30155
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR solution structure of the RRM1 domain of the post-transcriptional regulator HuR

Deposition date:

2016-08-15

Original release date:

2017-08-04

Authors:

Lixa, C.; Mujo, A.; Jendiroba, K.; Almeida, F.; Lima, L.; Pinheiro, A.

Citation:

Citation: Lixa, C.; Mujo, A.; Magalhaes, M.; Almeida, F.; Lima, L.; Pinheiro, A.. "Oligomeric transition and dynamics of RNA binding by the HuR RRM1 domain in solution" J. Biomol. NMR 72, 179-192 (2018).
PubMed: 30535889

Assembly members:

Assembly members:
entity_1, polymer, 101 residues, 11220.585 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: RP1B

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: GHMSNGYEDHMAEDCRGDIG RTNLIVNYLPQNMTQDELRS LFSSIGEVESAKLIRDKVAG HSLGYGFVNYVTAKDAERAI NTLNGLRLQSKTIKVSYARP S

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	412
15N chemical shifts	106
1H chemical shifts	666

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity_1	1

Entities:

Entity 1, entity_1 101 residues - 11220.585 Da.

1

GLY

HIS

MET

SER

ASN

GLY

TYR

GLU

ASP

HIS

2

MET

ALA

GLU

ASP

CYS

ARG

GLY

ASP

ILE

GLY

3

ARG

THR

ASN

LEU

ILE

VAL

ASN

TYR

LEU

PRO

4

GLN

ASN

MET

THR

GLN

ASP

GLU

LEU

ARG

SER

5

LEU

PHE

SER

ILE

GLY

GLU

VAL

GLU

SER

6

ALA

LYS

LEU

ILE

ARG

ASP

LYS

VAL

ALA

GLY

7

HIS

SER

LEU

GLY

TYR

GLY

PHE

VAL

ASN

TYR

8

VAL

THR

ALA

LYS

ASP

ALA

GLU

ARG

ALA

ILE

9

ASN

THR

LEU

ASN

GLY

LEU

ARG

LEU

GLN

SER

10

LYS

THR

ILE

LYS

VAL

SER

TYR

ALA

ARG

PRO

11

SER

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sample_2	isotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sample_2	isotropic	sample_conditions_1
3D HNCACB	sample_2	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_2	isotropic	sample_conditions_1
3D (H)CC(CO)NH	sample_2	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_2	isotropic	sample_conditions_1
3D HN(CA)CO	sample_2	isotropic	sample_conditions_1
3D HNCO	sample_2	isotropic	sample_conditions_1
3D HC(C)H-TOCSY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY aromatic	sample_2	isotropic	sample_conditions_1

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CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks

BMRB Entry 30155

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers: