BMRB Entry 30102

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PDB ID: 5kes
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR30102
MolProbity Validation Chart

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Title:
Solution structure of the yeast Ddi1 HDD domain
Deposition date:
2016-06-10
Original release date:
2016-09-30
Authors:
Trempe, J.-F.; Ratcliffe, C.; Veverka, V.; Saskova, K.; Gehring, K.
Citation:

Citation: Trempe, J.; Saskova, K.; Siva, M.; Ratcliffe, C.; Veverka, V.; Hoegl, A.; Menade, M.; Feng, X.; Shenker, S.; Svoboda, M.; Kozisek, M.; Konvalinka, J.; Gehring, K.. "Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family."  Sci. Rep. 6, 33671-33671 (2016).
PubMed: 27646017

Assembly members:

Assembly members:
entity_1, polymer, 116 residues, 13309.941 Da.

Natural source:

Natural source:   Common Name: Baker's yeast   Taxonomy ID: 559292   Superkingdom: Eukaryota   Kingdom: Fungi   Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli K-12   Vector: pGEX-6P1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: GPLGSATLSDEAFIEQFRQE LLNNQMLRSQLILQIPGLND LVNDPLLFRERLGPLILQRR YGGYNTAMNPFGIPQDEYTR LMANPDDPDNKKRIAELLDQ QAIDEQLRNAIEYTPE

Data sets:
Data typeCount
13C chemical shifts507
15N chemical shifts126
1H chemical shifts857

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11

Entities:

Entity 1, entity_1 116 residues - 13309.941 Da.

1   GLYPROLEUGLYSERALATHRLEUSERASP
2   GLUALAPHEILEGLUGLNPHEARGGLNGLU
3   LEULEUASNASNGLNMETLEUARGSERGLN
4   LEUILELEUGLNILEPROGLYLEUASNASP
5   LEUVALASNASPPROLEULEUPHEARGGLU
6   ARGLEUGLYPROLEUILELEUGLNARGARG
7   TYRGLYGLYTYRASNTHRALAMETASNPRO
8   PHEGLYILEPROGLNASPGLUTYRTHRARG
9   LEUMETALAASNPROASPASPPROASPASN
10   LYSLYSARGILEALAGLULEULEUASPGLN
11   GLNALAILEASPGLUGLNLEUARGASNALA
12   ILEGLUTYRTHRPROGLU

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