BMRB Entry 2785

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR2785

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Dynamics of Methyl Groups in Proteins As Studied by Proton-Detected 13C NMR Spectroscopy. Application to the Leucine Residues of Staphylococcal Nuclease

Deposition date:

1995-07-31

Original release date:

1995-07-31

Authors:

Nicholson, Linda; Kay, Lewis; Baldisseri, Donna; Arango, Julian; Young, Paul; Bax, Ad; Torchia, Dennis

Citation:

Citation: Nicholson, Linda; Kay, Lewis; Baldisseri, Donna; Arango, Julian; Young, Paul; Bax, Ad; Torchia, Dennis. "Dynamics of Methyl Groups in Proteins As Studied by Proton-Detected 13C NMR Spectroscopy. Application to the Leucine Residues of Staphylococcal Nuclease" Biochemistry 31, 5253-5263 (1992).

Assembly members:

Assembly members:
micrococcal nuclease, polymer, 156 residues, Formula weight is not available

Natural source:

Natural source: Common Name: not available Taxonomy ID: 1280 Superkingdom: Bacteria Kingdom: not available Genus/species: Staphylococcus aureus

Experimental source:

Experimental source: Production method: not available

Entity Sequences (FASTA):

Entity Sequences (FASTA):
micrococcal nuclease: MDPTVYSATSTKKLHKEPAT LIKAIDGDTVKLMYKGQPMT FRLLLVDTPETKHPKKGVEK YGPEASAFTKKMVENAKKIE VEFNKGQRTDKYGRGLAYIY ADGKMVNEALVRQGLAKVAY VYKPNNTHEQHLRKSEAQAK KEKLNIWSENDADSGQ

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_data_set_one

Data type	Count
13C chemical shifts	22
1H chemical shifts	77

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	micrococcal nuclease	1

Entities:

Entity 1, micrococcal nuclease 156 residues - Formula weight is not available

1

MET

ASP

PRO

THR

VAL

TYR

SER

ALA

THR

SER

2

THR

LYS

LEU

HIS

LYS

GLU

PRO

ALA

THR

3

LEU

ILE

LYS

ALA

ILE

ASP

GLY

ASP

THR

VAL

4

LYS

LEU

MET

TYR

LYS

GLY

GLN

PRO

MET

THR

5

PHE

ARG

LEU

VAL

ASP

THR

PRO

GLU

6

THR

LYS

HIS

PRO

LYS

GLY

VAL

GLU

LYS

7

TYR

GLY

PRO

GLU

ALA

SER

ALA

PHE

THR

LYS

8

LYS

MET

VAL

GLU

ASN

ALA

LYS

ILE

GLU

9

VAL

GLU

PHE

ASN

LYS

GLY

GLN

ARG

THR

ASP

10

LYS

TYR

GLY

ARG

GLY

LEU

ALA

TYR

ILE

TYR

11

ALA

ASP

GLY

LYS

MET

VAL

ASN

GLU

ALA

LEU

12

VAL

ARG

GLN

GLY

LEU

ALA

LYS

VAL

ALA

TYR

13

VAL

TYR

LYS

PRO

ASN

THR

HIS

GLU

GLN

14

HIS

LEU

ARG

LYS

SER

GLU

ALA

GLN

ALA

LYS

15

LYS

GLU

LYS

LEU

ASN

ILE

TRP

SER

GLU

ASN

16

ASP

ALA

ASP

SER

GLY

GLN

Samples:

sample_one:

sample_condition_set_one: pH: 7 na; temperature: 310 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_condition_set_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

Related Database Links:

BMRB	136 1581 1582 16585 1704 17718 1874 1875 1876 1877 1878 188 189 2784 4010 4052 4053
PDB	1A2T 1A2U 1A3T 1A3U 1A3V 1AEX 1ENA 1ENC 1EY0 1EY4 1EY5 1EY6 1EY7 1EYD 1EZ8 1JOK 1JOO 1JOQ 1JOR 1KAA 1KAB 1KDA 1KDB 1KDC 1NSN 1NUC 1RKN 1SNC 1SNM 1SNO 1STB 1STG 1STH 1STN 1STY 1SYC 1SYD 1SYE 1SYF 1SYG 2ENB 2EXZ 2EY1 2EY2 2EY5 2EY6 2EYF 2EYH 2EYJ 2EYL 2EYM 2EYO 2EYP 2F0D 2F0E 2F0F 2F0G 2F0H 2F0I 2F0J 2F3V 2F3W 2KHS 2KQ3 2NUC 2SNM 2SNS 2SOB 3NUC 4G57 4K14 4K8I 4K8J 4QB4 4WOR 5NUC
DBJ	BAB94634 BAF67032 BAR08312 BAR11036 BAS50937
EMBL	CAA24594 CAG39855 CAG42530 CAQ49298 CBI48745
GB	AAC14660 AAW36415 ABD22328 ABD29945 ABF58092
PRF	1109959A 710414A
REF	WP_000141556 WP_001548082 WP_001566557 WP_001574556 WP_001641381
SP	P00644 Q5HHM4 Q6GB41 Q6GIK1 Q8NXI6
AlphaFold	P00644 Q5HHM4 Q6GB41 Q6GIK1 Q8NXI6