BMRB Entry 27482

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR27482

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Title:
Amide backbone chemical shift assignments for SET nuclear proto-oncogene.
Deposition date:
2018-05-15
Original release date:
2019-04-12
Authors:
Parnham, Stuart; De Palma, Ryan; Ogretmen, Besim
Citation:

Citation: De Palma, Ryan; Parnham, Stuart; Li, Yitong; Oaks, Joshua; Peterson, Yuri; Szulc, Zdzislaw; Roth, Braden; Xing, Yongna; Ogretmen, Besim. "The NMR-based characterization of the FTY720-SET complex reveals an alternative mechanism for the attenuation of the inhibitory SET-PP2A interaction"  FASEB J. 33, 7647-7666 (2019).
PubMed: 30917007

Assembly members:

Assembly members:
NdCd-SET_nuclear_proto-oncogene, polymer, 205 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET-28b(+)

Entity Sequences (FASTA):

Entity Sequences (FASTA):
NdCd-SET_nuclear_proto-oncogene: GSMTSEKEQQEAIEHIDEVQ NEIDRLNEQASEEILKVEQK YNKLRQPFFQKRSELIAKIP NFWVTTFVNHPQVSALLGEE DEEALHYLTRVEVTEFEDIK SGYRIDFYFDENPYFENKVL SKEFHLNESGDPSSKSTEIK WKSGKDLTKRSSQTQNKASR KRQHEEPESFFTWFTDHSDA GADELGEVIKDDIWPNPLQY YLVPD

Data sets:
Data typeCount
13C chemical shifts106
15N chemical shifts92
1H chemical shifts91

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1NdCd-SET, subunit 11
2NdCd-SET, subunit 21

Entities:

Entity 1, NdCd-SET, subunit 1 205 residues - Formula weight is not available

Residues GSM (-3, -2, -1)

1   GLYSERMETTHRSERGLULYSGLUGLNGLN
2   GLUALAILEGLUHISILEASPGLUVALGLN
3   ASNGLUILEASPARGLEUASNGLUGLNALA
4   SERGLUGLUILELEULYSVALGLUGLNLYS
5   TYRASNLYSLEUARGGLNPROPHEPHEGLN
6   LYSARGSERGLULEUILEALALYSILEPRO
7   ASNPHETRPVALTHRTHRPHEVALASNHIS
8   PROGLNVALSERALALEULEUGLYGLUGLU
9   ASPGLUGLUALALEUHISTYRLEUTHRARG
10   VALGLUVALTHRGLUPHEGLUASPILELYS
11   SERGLYTYRARGILEASPPHETYRPHEASP
12   GLUASNPROTYRPHEGLUASNLYSVALLEU
13   SERLYSGLUPHEHISLEUASNGLUSERGLY
14   ASPPROSERSERLYSSERTHRGLUILELYS
15   TRPLYSSERGLYLYSASPLEUTHRLYSARG
16   SERSERGLNTHRGLNASNLYSALASERARG
17   LYSARGGLNHISGLUGLUPROGLUSERPHE
18   PHETHRTRPPHETHRASPHISSERASPALA
19   GLYALAASPGLULEUGLYGLUVALILELYS
20   ASPASPILETRPPROASNPROLEUGLNTYR
21   TYRLEUVALPROASP

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks