BMRB Entry 26772

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR26772

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
Chemical shift assignments of PfEMP1 ATSCore - variant PFF0845c
Deposition date:
2016-04-01
Original release date:
2017-08-01
Authors:
Cutts, Erin; Vakonakis, Ioannis
Citation:

Citation: Cutts, Erin; Laasch, Niklas; Reiter, Dirk; Trenker, Raphael; Slater, Leanne; Stansfeld, Phillip; Vakonakis, Ioannis. "Structural analysis of P. falciparum KAHRP and PfEMP1 complexes with host erythrocyte spectrin suggests a model for cytoadherent knob protrusions"  PLoS Pathog. 13, e1006552-e1006552 (2017).
PubMed: 28806784

Assembly members:

Assembly members:
Core8, polymer, 83 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: malaria parasite P. falciparum   Taxonomy ID: 5833   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: Plasmodium falciparum

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET16c

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Core8: GPLGSTNKFTDNEWNQLKQD FISNISQNSQMDLVAKQTHN DPIVNQINLFHKWLDRHRNM CEQWDKNKKEELLDKLNEEW NKE

Data sets:
Data typeCount
13C chemical shifts242
15N chemical shifts80
1H chemical shifts80

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Core81

Entities:

Entity 1, Core8 83 residues - Formula weight is not available

Residues 1-5 represent a cloning artefact This domain construct excludes a large flexible linker present in the WT molecule

1   GLYPROLEUGLYSERTHRASNLYSPHETHR
2   ASPASNGLUTRPASNGLNLEULYSGLNASP
3   PHEILESERASNILESERGLNASNSERGLN
4   METASPLEUVALALALYSGLNTHRHISASN
5   ASPPROILEVALASNGLNILEASNLEUPHE
6   HISLYSTRPLEUASPARGHISARGASNMET
7   CYSGLUGLNTRPASPLYSASNLYSLYSGLU
8   GLULEULEUASPLYSLEUASNGLUGLUTRP
9   ASNLYSGLU

Related Database Links:

UNP C6KT15
AlphaFold C6KT15

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks