BMRB Entry 25400

Name: Solution structure of firefly light organ fatty acid binding protein (lcFABP)
Published: 2016-01-19

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PDB ID: 2n93
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR25400
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of firefly light organ fatty acid binding protein (lcFABP)

Deposition date:

2014-12-18

Original release date:

2016-01-19

Authors:

Tseng, Kai-Li; Lyu, Ping-Chiang

Citation:

Citation: Tseng, Kai-Li; Lee, Yi-Zong; Chen, Yun-Ru; Lyu, Ping-Chiang. "(1)H, (15)N and (13)C resonance assignments of light organ-associated fatty acid-binding protein of Taiwanese fireflies" Biomol. NMR Assign. 10, 71-74 (2016).
PubMed: 26373428

Assembly members:

Assembly members:
lcFABP, polymer, 130 residues, Formula weight is not available

Natural source:

Natural source: Common Name: beetles Taxonomy ID: 1071519 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Luciola cerata

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET23a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
lcFABP: MVQLAGTYKLEKNENFEEYL AALGVPQDSIKKANSPGVVY EIIVNGNKFTFKSSSGMNST LIVNEEVEEVLGTVNMNIKS FTKLEGSKLVVNSELPDGRK GTRTYEFCDKGFVLTMCAGD MVAKRYFIRT

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	512
15N chemical shifts	136
1H chemical shifts	853

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	lcFABP	1

Entities:

Entity 1, lcFABP 130 residues - Formula weight is not available

1	MET	VAL	GLN	LEU	ALA	GLY	THR	TYR	LYS	LEU
2	GLU	LYS	ASN	GLU	ASN	PHE	GLU	GLU	TYR	LEU
3	ALA	ALA	LEU	GLY	VAL	PRO	GLN	ASP	SER	ILE
4	LYS	LYS	ALA	ASN	SER	PRO	GLY	VAL	VAL	TYR
5	GLU	ILE	ILE	VAL	ASN	GLY	ASN	LYS	PHE	THR
6	PHE	LYS	SER	SER	SER	GLY	MET	ASN	SER	THR
7	LEU	ILE	VAL	ASN	GLU	GLU	VAL	GLU	GLU	VAL
8	LEU	GLY	THR	VAL	ASN	MET	ASN	ILE	LYS	SER
9	PHE	THR	LYS	LEU	GLU	GLY	SER	LYS	LEU	VAL
10	VAL	ASN	SER	GLU	LEU	PRO	ASP	GLY	ARG	LYS
11	GLY	THR	ARG	THR	TYR	GLU	PHE	CYS	ASP	LYS
12	GLY	PHE	VAL	LEU	THR	MET	CYS	ALA	GLY	ASP
13	MET	VAL	ALA	LYS	ARG	TYR	PHE	ILE	ARG	THR

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D CC(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D HCCH-COSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aliphatic	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1

BMRB Entry 25400

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	VAL	GLN	LEU	ALA	GLY	THR	TYR	LYS	LEU
2	GLU	LYS	ASN	GLU	ASN	PHE	GLU	GLU	TYR	LEU
3	ALA	ALA	LEU	GLY	VAL	PRO	GLN	ASP	SER	ILE
4	LYS	LYS	ALA	ASN	SER	PRO	GLY	VAL	VAL	TYR
5	GLU	ILE	ILE	VAL	ASN	GLY	ASN	LYS	PHE	THR
6	PHE	LYS	SER	SER	SER	GLY	MET	ASN	SER	THR
7	LEU	ILE	VAL	ASN	GLU	GLU	VAL	GLU	GLU	VAL
8	LEU	GLY	THR	VAL	ASN	MET	ASN	ILE	LYS	SER
9	PHE	THR	LYS	LEU	GLU	GLY	SER	LYS	LEU	VAL
10	VAL	ASN	SER	GLU	LEU	PRO	ASP	GLY	ARG	LYS
11	GLY	THR	ARG	THR	TYR	GLU	PHE	CYS	ASP	LYS
12	GLY	PHE	VAL	LEU	THR	MET	CYS	ALA	GLY	ASP
13	MET	VAL	ALA	LYS	ARG	TYR	PHE	ILE	ARG	THR

1	MET	VAL	GLN	LEU	ALA	GLY	THR	TYR	LYS	LEU
2	GLU	LYS	ASN	GLU	ASN	PHE	GLU	GLU	TYR	LEU
3	ALA	ALA	LEU	GLY	VAL	PRO	GLN	ASP	SER	ILE
4	LYS	LYS	ALA	ASN	SER	PRO	GLY	VAL	VAL	TYR
5	GLU	ILE	ILE	VAL	ASN	GLY	ASN	LYS	PHE	THR
6	PHE	LYS	SER	SER	SER	GLY	MET	ASN	SER	THR
7	LEU	ILE	VAL	ASN	GLU	GLU	VAL	GLU	GLU	VAL
8	LEU	GLY	THR	VAL	ASN	MET	ASN	ILE	LYS	SER
9	PHE	THR	LYS	LEU	GLU	GLY	SER	LYS	LEU	VAL
10	VAL	ASN	SER	GLU	LEU	PRO	ASP	GLY	ARG	LYS
11	GLY	THR	ARG	THR	TYR	GLU	PHE	CYS	ASP	LYS
12	GLY	PHE	VAL	LEU	THR	MET	CYS	ALA	GLY	ASP
13	MET	VAL	ALA	LYS	ARG	TYR	PHE	ILE	ARG	THR

1	MET	VAL	GLN	LEU	ALA	GLY	THR	TYR	LYS	LEU
2	GLU	LYS	ASN	GLU	ASN	PHE	GLU	GLU	TYR	LEU
3	ALA	ALA	LEU	GLY	VAL	PRO	GLN	ASP	SER	ILE
4	LYS	LYS	ALA	ASN	SER	PRO	GLY	VAL	VAL	TYR
5	GLU	ILE	ILE	VAL	ASN	GLY	ASN	LYS	PHE	THR
6	PHE	LYS	SER	SER	SER	GLY	MET	ASN	SER	THR
7	LEU	ILE	VAL	ASN	GLU	GLU	VAL	GLU	GLU	VAL
8	LEU	GLY	THR	VAL	ASN	MET	ASN	ILE	LYS	SER
9	PHE	THR	LYS	LEU	GLU	GLY	SER	LYS	LEU	VAL
10	VAL	ASN	SER	GLU	LEU	PRO	ASP	GLY	ARG	LYS
11	GLY	THR	ARG	THR	TYR	GLU	PHE	CYS	ASP	LYS
12	GLY	PHE	VAL	LEU	THR	MET	CYS	ALA	GLY	ASP
13	MET	VAL	ALA	LYS	ARG	TYR	PHE	ILE	ARG	THR