BMRB Entry 19985

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR19985

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Title:
Backbone, side chain and heme resonance assignments of the triheme cytochrome PpcD from Geobacter sulfurreducens
Deposition date:
2014-05-22
Original release date:
2017-07-11
Authors:
Dantas, Joana; Salgueiro, Carlos; Bruix, Marta
Citation:

Citation: Dantas, Joana; Salgueiro, Carlos; Bruix, Marta. "Backbone, side chain and heme resonance assignments of the triheme cytochrome PpcD from Geobacter sulfurreducens"  Biomol. NMR Assign. 9, 211-214 (2015).
PubMed: 25209145

Assembly members:

Assembly members:
PpcD_polypeptide, polymer, 72 residues, 7713.88 Da.
entity_HEM, non-polymer, 616.487 Da.

Natural source:

Natural source:   Common Name: Geobacter sulfurreducens   Taxonomy ID: 35554   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Geobacter sulfurreducens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pVA203

Entity Sequences (FASTA):

Entity Sequences (FASTA):
PpcD_polypeptide: HDKVVVLEAKNGNVTFDHKK HAGVKGECKACHETEAGGKI AGMGKDWAHKTCTGCHKEMG KGPTKCGECHKK

Data sets:
Data typeCount
13C chemical shifts205
15N chemical shifts78
1H chemical shifts531

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1PpcD1
2PROTOPORPHYRIN IX CONTAINING FE_12
3PROTOPORPHYRIN IX CONTAINING FE_22
4PROTOPORPHYRIN IX CONTAINING FE_32

Entities:

Entity 1, PpcD 72 residues - 7713.88 Da.

1   HISASPLYSVALVALVALLEUGLUALALYS
2   ASNGLYASNVALTHRPHEASPHISLYSLYS
3   HISALAGLYVALLYSGLYGLUCYSLYSALA
4   CYSHISGLUTHRGLUALAGLYGLYLYSILE
5   ALAGLYMETGLYLYSASPTRPALAHISLYS
6   THRCYSTHRGLYCYSHISLYSGLUMETGLY
7   LYSGLYPROTHRLYSCYSGLYGLUCYSHIS
8   LYSLYS

Entity 2, PROTOPORPHYRIN IX CONTAINING FE_1 - C34 H32 Fe N4 O4 - 616.487 Da.

1   HEM

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks