BMRB Entry 19581
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PDB ID: 2mg1
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR19581
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Citation: Serrano, Soraya; Apellaniz, Beatriz; Huarte, Nerea; Jimenez, M. Angeles; Nieva, Jose. "The Atomic Structure of the HIV-1 gp41 Transmembrane Domain and its Connection to the Inmmunogenic Membrane-proximal External Region" .
Assembly members:
TMDp, polymer, 27 residues, 3006.957 Da.
Natural source: Common Name: HIV Taxonomy ID: 12721 Superkingdom: Viruses Kingdom: not available Genus/species: Lentivirus Human immunodeficiency virus
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
TMDp: KKKLFIMIVGGLVGLRIVFA
VLSIKKK
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 94 |
| 1H chemical shifts | 231 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | peptide derived from the trans-membrane region of HIV-1 gp41 | 1 |
Entities:
Entity 1, peptide derived from the trans-membrane region of HIV-1 gp41 27 residues - 3006.957 Da.
Residues KLFIMIVGGLVGLRIVFAVLSI correspond to residues 683-704 of glycoprotein gp41 from HIV. The two N-terminal residues (KK) and the three C-terminal residues (KKK) were added to increase peptide solubility.
| 1 | LYS | LYS | LYS | LEU | PHE | ILE | MET | ILE | VAL | GLY | ||||
| 2 | GLY | LEU | VAL | GLY | LEU | ARG | ILE | VAL | PHE | ALA | ||||
| 3 | VAL | LEU | SER | ILE | LYS | LYS | LYS |