BMRB Entry 19074
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR19074
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Citation: Santiveri, Clara; Garcia-Mayoral, M. Flor; Perez-Canadillas, Jose; Jimenez, M. Angeles. "NMR structure note: PHD domain from death inducer obliterator protein and its interaction with H3K4me3." J. Biomol. NMR 56, 183-190 (2013).
PubMed: 23579637
Assembly members:
Dido_PHD, polymer, 61 residues, 7048.059 Da.
Dido_PHD, polymer, 61 residues, 7048.059 Da.
ZINC ION, non-polymer, 65.409 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET28
Entity Sequences (FASTA):
Dido_PHD: GSMDPNALYCICRQPHNNRF
MICCDRCEEWFHGDCVGISE
ARGRLLERNGEDYICPNCTI
L
Dido_PHD: GSMDPNALYCICRQPHNNRF
MICCDRCEEWFHGDCVGISE
ARGRLLERNGEDYICPNCTI
L
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 267 |
| 15N chemical shifts | 66 |
| 1H chemical shifts | 383 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | entity_1 | 1 |
| 2 | entity_2 | 2 |
| 3 | ZINC ION_1 | 3 |
| 4 | ZINC ION_2 | 3 |
Entities:
Entity 1, entity_1 61 residues - 7048.059 Da.
Residues 1-3, GSM, are the cloning tag. Residues 4-61 correspond to residues 265-322 from human Dido or to residues 262-319 from mouse Dido.
| 1 | GLY | SER | MET | ASP | PRO | ASN | ALA | LEU | TYR | CYS | ||||
| 2 | ILE | CYS | ARG | GLN | PRO | HIS | ASN | ASN | ARG | PHE | ||||
| 3 | MET | ILE | CYS | CYS | ASP | ARG | CYS | GLU | GLU | TRP | ||||
| 4 | PHE | HIS | GLY | ASP | CYS | VAL | GLY | ILE | SER | GLU | ||||
| 5 | ALA | ARG | GLY | ARG | LEU | LEU | GLU | ARG | ASN | GLY | ||||
| 6 | GLU | ASP | TYR | ILE | CYS | PRO | ASN | CYS | THR | ILE | ||||
| 7 | LEU |
Entity 2, entity_2 61 residues - 7048.059 Da.
Residues 1-3, GSM, are the cloning tag. Residues 4-61 correspond to residues 265-322 from human Dido or to residues 262-319 from mouse Dido.
| 1 | GLY | SER | MET | ASP | PRO | ASN | ALA | LEU | TYR | CYS | ||||
| 2 | ILE | CYS | ARG | GLN | PRO | HIS | ASN | ASN | ARG | PHE | ||||
| 3 | MET | ILE | CYS | CYS | ASP | ARG | CYS | GLU | GLU | TRP | ||||
| 4 | PHE | HIS | GLY | ASP | CYS | VAL | GLY | ILE | SER | GLU | ||||
| 5 | ALA | ARG | GLY | ARG | LEU | LEU | GLU | ARG | ASN | GLY | ||||
| 6 | GLU | ASP | TYR | ILE | CYS | PRO | ASN | CYS | THR | ILE | ||||
| 7 | LEU |
Entity 3, ZINC ION_1 - 65.409 Da.
| 1 | ZN |
Related Database Links:
| UNP | Q9BTC0 Q8C9B9 Q9BTC0 Q8C9B9 |
| BMRB | 18963 18963 |
| PDB | 1WEM 2M3H 4L7X |
| DBJ | BAA20791 BAA92094 BAC31270 BAC97927 BAE88140 BAA20791 BAA92094 BAC31270 BAC97927 BAE88140 |
| EMBL | CAB48401 CAG31367 CAH89967 CAB48401 CAG31367 CAH89967 |
| GB | AAH00770 AAH04237 AAH14489 AAH29110 AAH96662 AAH00770 AAH04237 AAH14489 AAH29110 AAH96662 |
| REF | NP_001124926 NP_001180298 NP_001180299 NP_001278361 NP_001278362 NP_001124926 NP_001180298 NP_001180299 NP_001278361 NP_001278362 |
| SP | Q8C9B9 Q9BTC0 Q8C9B9 Q9BTC0 |
| AlphaFold | Q9UFB6 Q9WV00 Q9UFB6 Q9WV00 Q8C9B9 Q9BTC0 Q8C9B9 Q9BTC0 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
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SPARKY: Backbone
or all simulated peaks