BMRB Entry 19059

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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR19059
MolProbity Validation Chart

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NMR-STAR v3 text file.
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Title:
ns5a308
Deposition date:
2013-02-27
Original release date:
2014-03-03
Authors:
Montserret, Roland; Badillo, Aurelie; Hanoulle, Xavier; Lippens, Guy; Penin, Francois
Citation:

Citation: Montserret, Roland; Badillo, Aurelie; Hanoulle, Xavier; Lippens, Guy; Penin, Francois. "ns5a308"  J. Biol. Chem. ., .-..

Assembly members:

Assembly members:
entity, polymer, 20 residues, 2414.867 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: 333284   Superkingdom: Viruses   Kingdom: not available   Genus/species: Hepacivirus Hepatitis C Virus

Experimental source:

Experimental source:   Production method: chemical synthesis   Host organism: none   Vector: none

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: KFPRAMPIWARPDYNPPLLE

Data sets:
Data typeCount
13C chemical shifts81
15N chemical shifts14
1H chemical shifts149

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1ns5a3081

Entities:

Entity 1, ns5a308 20 residues - 2414.867 Da.

1   LYSPHEPROARGALAMETPROILETRPALA
2   ARGPROASPTYRASNPROPROLEULEUGLU

Samples:

sample_1: entity 10 ± 1 mM; sodium phosphate 20 ± 1 mM; sodium chloride 30 ± 1 mM; H20 95 ± 1 %; D20 5 ± 1 %

sample_2: entity, [U-100% 13C; U-100% 15N], 1 ± 0.2 mM; sodium phosphate 50 ± 1 mM; sodium chloride 50 ± 1 mM; H20 95 ± 1 %; D20 5 ± 1 %

sample_conditions_1: ionic strength: 40 mM; pH: 6.5; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
2D 1H-13C HSQCsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_2isotropicsample_conditions_1
3D HNCACBsample_2isotropicsample_conditions_1
3D HNCOCACBsample_2isotropicsample_conditions_1
3D HNCOsample_2isotropicsample_conditions_1
3D HNHAsample_2isotropicsample_conditions_1

Software:

TOPSPIN v2.1, Bruker Biospin - collection

SPARKY, Goddard - chemical shift assignment, data analysis

X-PLOR NIH v2.30, Schwieters, Kuszewski, Tjandra and Clore - structure solution

NMR spectrometers:

  • Bruker Avance 600 MHz

Related Database Links:

PDB
DBJ BAD73970 BAF56924 BAF56926 BAF56930 BAF56934
EMBL CAB41950 CAB41951 CAB46677 CAB46911 CAB46913
GB AAC41018 AAG22682 AAG22683 AAG22685 AAG22686
SP Q9WMX2
AlphaFold Q9WMX2

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks