BMRB Entry 18410

Name: 1H Chemical Shift Assignments for the third transmembrane domain from the human copper transport 1
Published: 2012-05-22

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PDB ID: 2ls4
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18410
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H Chemical Shift Assignments for the third transmembrane domain from the human copper transport 1

Deposition date:

2012-04-20

Original release date:

2012-05-22

Authors:

Yang, Lei; Huang, Zhaowei; Li, Fei

Citation:

Citation: Yang, Lei; Huang, Zhaowei; Li, Fei. "Structural insights into the transmembrane domains of human copper transporter 1." J. Pept. Sci. 18, 449-455 (2012).
PubMed: 22615137

Assembly members:

Assembly members:
entity, polymer, 24 residues, 2603.026 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: obtained from a vendor

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: YNGYLCIAVAAGAGTGYFLF SWKK

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	147

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	third transmembrane domain from the human copper transport 1	1

Entities:

Entity 1, third transmembrane domain from the human copper transport 1 24 residues - 2603.026 Da.

1

TYR

ASN

GLY

TYR

LEU

CYS

ILE

ALA

VAL

ALA

2

ALA

GLY

ALA

GLY

THR

GLY

TYR

PHE

LEU

PHE

3

SER

TRP

LYS

Samples:

sample_1: hCtr1-TMD3 2 mM; 40% hexafluoroisopropanol (HFIP) aqueous solution 40%

sample_conditions_1: pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1

Software:

CYANA, Guntert P. - refinement

NMR spectrometers:

Bruker Avance 500 MHz

PDB	2LS4
DBJ	BAC32891 BAE30315 BAE41687 BAF85200
EMBL	CAD13301 CAD38549 CAH91134
GB	AAB66306 AAF72546 AAH04315 AAH13611 AAH34674
REF	NP_001093851 NP_001125663 NP_001231046 NP_001244435 NP_001850
SP	O15431 Q5RAS6 Q8K211 Q8WNR0 Q9JK41
TPG	DAA26466
AlphaFold	O15431 Q5RAS6 Q8K211 Q8WNR0 Q9JK41