BMRB Entry 18211

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PDB ID: 2ly2
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR18211
MolProbity Validation Chart

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Title:
1H, 15N and 13C resonance assignments for the LOTUS2 and LOTUS3 RNA binding domains of mouse TDRD7
Deposition date:
2012-01-23
Original release date:
2012-03-20
Authors:
Cui, Gaofeng; Botuyan, Maria Victoria; Mer, Georges
Citation:

Citation: Cui, Gaofeng; Botuyan, Maria Victoria; Mer, Georges. "(1)H, (15)N and (13)C resonance assignments for the three LOTUS RNA binding domains of Tudor domain-containing protein TDRD7."  Biomol. NMR Assignments 7, 79-83 (2013).
PubMed: 22481467

Assembly members:

Assembly members:
TDRD7, polymer, 180 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pTEV

Entity Sequences (FASTA):

Entity Sequences (FASTA):
TDRD7: GHMDEVQNRIKEILDKHNNG IWISKLPHFYKEFYKEDLNQ GVLQQFEHWPHICTVEKPCG GGQDSLLYPARREQPLKSDQ DPEKELPPPPPAPKQEVPSQ GSPAVMPDVKEKVAELLGKY SSGLWASALPKAFEDMYKVK FPEDALKNLASLSDVCTINY ISGNTQKAILYAKLPLPTDK

Data sets:
Data typeCount
13C chemical shifts834
15N chemical shifts179
1H chemical shifts1316

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Lotus domains 2 and 31

Entities:

Entity 1, Lotus domains 2 and 3 180 residues - Formula weight is not available

1   GLYHISMETASPGLUVALGLNASNARGILE
2   LYSGLUILELEUASPLYSHISASNASNGLY
3   ILETRPILESERLYSLEUPROHISPHETYR
4   LYSGLUPHETYRLYSGLUASPLEUASNGLN
5   GLYVALLEUGLNGLNPHEGLUHISTRPPRO
6   HISILECYSTHRVALGLULYSPROCYSGLY
7   GLYGLYGLNASPSERLEULEUTYRPROALA
8   ARGARGGLUGLNPROLEULYSSERASPGLN
9   ASPPROGLULYSGLULEUPROPROPROPRO
10   PROALAPROLYSGLNGLUVALPROSERGLN
11   GLYSERPROALAVALMETPROASPVALLYS
12   GLULYSVALALAGLULEULEUGLYLYSTYR
13   SERSERGLYLEUTRPALASERALALEUPRO
14   LYSALAPHEGLUASPMETTYRLYSVALLYS
15   PHEPROGLUASPALALEULYSASNLEUALA
16   SERLEUSERASPVALCYSTHRILEASNTYR
17   ILESERGLYASNTHRGLNLYSALAILELEU
18   TYRALALYSLEUPROLEUPROTHRASPLYS

Related Database Links:

PDB 2LY1 2LY2
GB AAH29689
REF NP_001277404 NP_666254 XP_006537580 XP_006537581
SP Q8K1H1
AlphaFold Q8K1H1

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