BMRB Entry 18181

Name: Solution structure of GspC-HR of typeII secretion system
Published: 2012-03-09

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PDB ID: 2lnv
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18181
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of GspC-HR of typeII secretion system

Deposition date:

2012-01-05

Original release date:

2012-03-09

Authors:

Gu, Shuang; Kelly, Geoff; Pickersgill, Richard

Citation:

Citation: Gu, Shuang; Kelly, Geoff; Wang, Xiaohui; Frenkiel, Tom; Shevchik, Vladimir; Pickersgill, Richard. "Solution structure of homology region (HR) domain of type II secretion system." J. Biol. Chem. 287, 9072-9080 (2012).
PubMed: 22253442

Assembly members:

Assembly members:
entity, polymer, 104 residues, 11138.382 Da.

Natural source:

Natural source: Common Name: Dickeya dadantii Taxonomy ID: 204038 Superkingdom: Bacteria Kingdom: not available Genus/species: Dickeya dadantii

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET14b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: GSHMLEMAGALDASQMSNLP PSTLNLSLTGVMAGDDDSRS IAIISKDNEQFSRGVNEEVP GYNAKIVSIRPDRVVLQYQG RYEVLGLYSQEDSGSDGVPG AQVR

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	260
15N chemical shifts	72
1H chemical shifts	436

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	GspC-HR of typeII secretion system	1

Entities:

Entity 1, GspC-HR of typeII secretion system 104 residues - 11138.382 Da.

1

GLY

SER

HIS

MET

LEU

GLU

MET

ALA

GLY

ALA

2

LEU

ASP

ALA

SER

GLN

MET

SER

ASN

LEU

PRO

3

PRO

SER

THR

LEU

ASN

LEU

SER

LEU

THR

GLY

4

VAL

MET

ALA

GLY

ASP

SER

ARG

SER

5

ILE

ALA

ILE

SER

LYS

ASP

ASN

GLU

GLN

6

PHE

SER

ARG

GLY

VAL

ASN

GLU

VAL

PRO

7

GLY

TYR

ASN

ALA

LYS

ILE

VAL

SER

ILE

ARG

8

PRO

ASP

ARG

VAL

LEU

GLN

TYR

GLN

GLY

9

ARG

TYR

GLU

VAL

LEU

GLY

LEU

TYR

SER

GLN

10

GLU

ASP

SER

GLY

SER

ASP

GLY

VAL

PRO

GLY

11

ALA

GLN

VAL

ARG

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D HNHA	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aliphatic	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	anisotropic	sample_conditions_1

PDB	2LNV
EMBL	CAA46369
GB	ADM99377
REF	WP_013318811 WP_038923436
SP	Q01564
AlphaFold	Q01564

BMRB Entry 18181

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: