BMRB Entry 18134

Name: SOLUTION STRUCTURE OF THE FIRST SAM DOMAIN OF ODIN
Published: 2012-01-25

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PDB ID: 2lmr
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18134
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

SOLUTION STRUCTURE OF THE FIRST SAM DOMAIN OF ODIN

Deposition date:

2011-12-12

Original release date:

2012-01-25

Authors:

Leone, Marilisa; Mercurio, Flavia

Citation:

Citation: Mercurio, Flavia Anna; Marasco, Daniela; Pirone, Luciano; Pedone, Emilia Maria; Pellecchia, Maurizio; Leone, Marilisa. "Solution structure of the first Sam domain of Odin and binding studies with the EphA2 receptor." Biochemistry 51, 2136-2145 (2012).
PubMed: 22332920

Assembly members:

Assembly members:
entity, polymer, 101 residues, 11308.773 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: PET15B

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: MGSSHHHHHHSSGLVPRGSH MISGLRTLEQSVGEWLESIG LQQYESKLLLNGFDDVHFLG SNVMEEQDLRDIGISDPQHR RKLLQAARSLPKVKALGYDG N

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	244
15N chemical shifts	81
1H chemical shifts	554

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	FIRST SAM DOMAIN OF ODIN	1

Entities:

Entity 1, FIRST SAM DOMAIN OF ODIN 101 residues - 11308.773 Da.

1

MET

GLY

SER

HIS

2

SER

GLY

LEU

VAL

PRO

ARG

GLY

SER

HIS

3

MET

ILE

SER

GLY

LEU

ARG

THR

LEU

GLU

GLN

4

SER

VAL

GLY

GLU

TRP

LEU

GLU

SER

ILE

GLY

5

LEU

GLN

TYR

GLU

SER

LYS

LEU

6

ASN

GLY

PHE

ASP

VAL

HIS

PHE

LEU

GLY

7

SER

ASN

VAL

MET

GLU

GLN

ASP

LEU

ARG

8

ASP

ILE

GLY

ILE

SER

ASP

PRO

GLN

HIS

ARG

9

ARG

LYS

LEU

GLN

ALA

ARG

SER

LEU

10

PRO

LYS

VAL

LYS

ALA

LEU

GLY

TYR

ASP

GLY

11

ASN

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_2	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_2	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1

PDB	2LMR
DBJ	BAA13218 BAG11153
GB	AAH31934 AAI32833 EAX03800 EAX03803 EAX03804
REF	NP_056060 XP_001111692 XP_003897533 XP_004043913 XP_005249021
SP	Q92625
AlphaFold	Q92625

BMRB Entry 18134

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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