BMRB Entry 18122

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR18122

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Title:
1H, 13C, and 15N resonance assignments of Photoactive Yellow Protein
Deposition date:
2011-12-08
Original release date:
2011-12-16
Authors:
Pool, Trijntje; Oktaviani, Nur; Kamikubo, Hironari; Kataoka, Mikio; Mulder, Frans
Citation:

Citation: Pool, Trijntje; Oktaviani, Nur Alia; Kamikubo, Hironari; Kataoka, Mikio; Mulder, Frans. "(1)H, (13)C, and (15)N resonance assignment of photoactive yellow protein."  Biomol. NMR Assignments 7, 97-100 (2013).
PubMed: 22528767

Assembly members:

Assembly members:
PYP, polymer, 125 residues, Formula weight is not available
HC4, non-polymer, 164.158 Da.

Natural source:

Natural source:   Common Name: Halorhodospira halophila   Taxonomy ID: 1053   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Halorhodospira halophila

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET

Entity Sequences (FASTA):

Entity Sequences (FASTA):
PYP: MEHVAFGSEDIENTLAKMDD GQLDGLAFGAIQLDGDGNIL QYNAAEGDITGRDPKQVIGK NFFKDVAPCTDSPEFYGKFK EGVASGNLNTMFEYTFDYQM TPTKVKVHMKKALSGDSYWV FVKRV

Data sets:
Data typeCount
13C chemical shifts544
15N chemical shifts132
1H chemical shifts699

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1PYP1
2chromophore2

Entities:

Entity 1, PYP 125 residues - Formula weight is not available

1   METGLUHISVALALAPHEGLYSERGLUASP
2   ILEGLUASNTHRLEUALALYSMETASPASP
3   GLYGLNLEUASPGLYLEUALAPHEGLYALA
4   ILEGLNLEUASPGLYASPGLYASNILELEU
5   GLNTYRASNALAALAGLUGLYASPILETHR
6   GLYARGASPPROLYSGLNVALILEGLYLYS
7   ASNPHEPHELYSASPVALALAPROCYSTHR
8   ASPSERPROGLUPHETYRGLYLYSPHELYS
9   GLUGLYVALALASERGLYASNLEUASNTHR
10   METPHEGLUTYRTHRPHEASPTYRGLNMET
11   THRPROTHRLYSVALLYSVALHISMETLYS
12   LYSALALEUSERGLYASPSERTYRTRPVAL
13   PHEVALLYSARGVAL

Entity 2, chromophore - C9 H8 O3 - 164.158 Da.

1   HC4

Related Database Links:

PDB 1D7E 1F98 1F9I 1GSV 1GSW 1GSX 1KOU 1NWZ 1ODV 1OT6 1OT9 1OTA 1OTB 1OTE 1OTI 1S1Y 1S1Z 1S4R 1S4S 1T18 1T19 1T1A 1T1B 1T1C 1TS0 1TS6 1TS7 1TS8 1UGU 1XFN 1XFQ 2D01 2D02 2I9V 2KX6 2PHY 2PYP 2PYR 2QJ5 2QJ7 2QWS 2ZOH 2ZOI 3PHY 3PYP 3UMD 3UME 3VE3 3VE4 4B9O 4BBT 4BBU 4BBV 4HY8 4I38 4I39 4I3A 4I3I 4I3J 4WL9 4WLA
EMBL CAA67391
GB AAA61735 AAB28014
SP P16113
AlphaFold P16113

Download HSQC peak lists in one of the following formats:
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SPARKY: Backbone or all simulated peaks