BMRB Entry 17903
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PDB ID: 2lir
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR17903
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Lan, Wenxian; Wang, Zhonghua; Yang, Zhongzheng; Zhu, Jing; Ying, Tianlei; Jiang, Xianwang; Zhang, Xu; Wu, Houming; Liu, Maili; Tan, Xiangshi; Cao, Chunyang; Huang, Zhong-xian. "Conformational toggling of Yeast Iso-1-cytochrome c in the oxidized and reduced states" PLoS One 6, e27219-. (2011).
PubMed: 22087268
Assembly members:
Iso-1-cytochrome, polymer, 108 residues, 12054.826 Da.
HEC, non-polymer, 618.503 Da.
Natural source: Common Name: baker's yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pBTR2
Entity Sequences (FASTA):
Iso-1-cytochrome: TEFKAGSAKKGATLFKTRCL
QCHTVEKGGPHKVGPNLHGI
FGRHSGQAEGYSYTDANIKK
NVLWDENNMSEYLTNHAKYI
PGTKMAFGGLKKEKDRNDLI
TYLKKATE
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 616 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Iso-1-cytochrome | 1 |
| 2 | HEC | 2 |
Entities:
Entity 1, Iso-1-cytochrome 108 residues - 12054.826 Da.
| 1 | THR | GLU | PHE | LYS | ALA | GLY | SER | ALA | LYS | LYS | ||||
| 2 | GLY | ALA | THR | LEU | PHE | LYS | THR | ARG | CYS | LEU | ||||
| 3 | GLN | CYS | HIS | THR | VAL | GLU | LYS | GLY | GLY | PRO | ||||
| 4 | HIS | LYS | VAL | GLY | PRO | ASN | LEU | HIS | GLY | ILE | ||||
| 5 | PHE | GLY | ARG | HIS | SER | GLY | GLN | ALA | GLU | GLY | ||||
| 6 | TYR | SER | TYR | THR | ASP | ALA | ASN | ILE | LYS | LYS | ||||
| 7 | ASN | VAL | LEU | TRP | ASP | GLU | ASN | ASN | MET | SER | ||||
| 8 | GLU | TYR | LEU | THR | ASN | HIS | ALA | LYS | TYR | ILE | ||||
| 9 | PRO | GLY | THR | LYS | MET | ALA | PHE | GLY | GLY | LEU | ||||
| 10 | LYS | LYS | GLU | LYS | ASP | ARG | ASN | ASP | LEU | ILE | ||||
| 11 | THR | TYR | LEU | LYS | LYS | ALA | THR | GLU |
Entity 2, HEC - C34 H34 Fe N4 O4 - 618.503 Da.
| 1 | HEC |
Related Database Links:
| BMRB | 131 15301 17845 17846 17904 19638 |
| PDB | 1CHH 1CHJ 1CRG 1CSU 1CSV 1CSW 1CSX 1CTY 1CTZ 1IRV 1IRW 1KYO 1LMS 1NMI 1S6V 1U74 1YCC 1YFC 1YIC 2BCN 2GB8 2HV4 2JQR 2LIR 2LIT 2MHM 2N18 2ORL 2PCC 2YCC 3CX5 3TYI 4MU8 4N0K 4P4Q |
| DBJ | GAA24396 |
| EMBL | CAA24605 CAA89576 CAY80764 |
| GB | AAA62856 AAA88751 AAB59344 AHY79034 AJP39735 |
| PRF | 1409323A |
| REF | NP_012582 |
| SP | P00044 |
| TPG | DAA08835 |
| AlphaFold | P00044 |