BMRB Entry 17318

Name: NMR solution structure of the protein YP_001092504.1
Published: 2010-12-16

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PDB ID: 2l6n
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17318
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR solution structure of the protein YP_001092504.1

Deposition date:

2010-11-23

Original release date:

2010-12-16

Authors:

Mohanty, Biswaranjan; Serrano, Pedro; Geralt, Michael; Horst, Reto; Wuthrich, Kurt

Citation:

Citation: Mohanty, Biswaranjan; Serrano, Pedro; Geralt, Michael; Horst, Reto; Wuthrich, Kurt. "NMR solution structure of the protein YP_001092504.1" .

Assembly members:

Assembly members:
YP_001092504.1, polymer, 132 residues, 14833.001 Da.

Natural source:

Natural source: Common Name: Shewanella loihica PV-4 Taxonomy ID: 323850 Superkingdom: Bacteria Kingdom: not available Genus/species: Shewanella loihica

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pSpeedET

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YP_001092504.1: GMTPQSDTPKVTGLKLKRKS RQLEISFDNGQQFTLSCELL RVYSPSAEVHGHGNPVLVTH KKNVNINAITPVGNYAVKLV FDDGHDTGLYSWKVLYDLAS NQVDLWENYLARLRAAKASR EPLIDMAVKYHT

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	542
15N chemical shifts	140
1H chemical shifts	933

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	YP_001092504.1	1

Entities:

Entity 1, YP_001092504.1 132 residues - 14833.001 Da.

1

GLY

MET

THR

PRO

GLN

SER

ASP

THR

PRO

LYS

2

VAL

THR

GLY

LEU

LYS

LEU

LYS

ARG

LYS

SER

3

ARG

GLN

LEU

GLU

ILE

SER

PHE

ASP

ASN

GLY

4

GLN

PHE

THR

LEU

SER

CYS

GLU

LEU

5

ARG

VAL

TYR

SER

PRO

SER

ALA

GLU

VAL

HIS

6

GLY

HIS

GLY

ASN

PRO

VAL

LEU

VAL

THR

HIS

7

LYS

ASN

VAL

ASN

ILE

ASN

ALA

ILE

THR

8

PRO

VAL

GLY

ASN

TYR

ALA

VAL

LYS

LEU

VAL

9

PHE

ASP

GLY

HIS

ASP

THR

GLY

LEU

TYR

10

SER

TRP

LYS

VAL

LEU

TYR

ASP

LEU

ALA

SER

11

ASN

GLN

VAL

ASP

LEU

TRP

GLU

ASN

TYR

LEU

12

ALA

ARG

LEU

ARG

ALA

LYS

ALA

SER

ARG

13

GLU

PRO

LEU

ILE

ASP

MET

ALA

VAL

LYS

TYR

14

HIS

THR

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
4D APSY-HACANH	sample_1	isotropic	sample_conditions_1
5D APSY-HACACONH	sample_1	isotropic	sample_conditions_1
5D APSY-CBCACONH	sample_1	isotropic	sample_conditions_1
15N resolved [1H,1H]-NOESY	sample_1	isotropic	sample_conditions_1
13Cali resolved [1H,1H]-NOESY	sample_1	isotropic	sample_conditions_1
13Caro resolved [1H,1H]-NOESY	sample_1	isotropic	sample_conditions_1
15 N {1H} - NOE	sample_1	isotropic	sample_conditions_1

PDB	2L6N
GB	ABO22245 KIO35783
REF	WP_011864179 WP_041510794

BMRB Entry 17318

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: