BMRB Entry 17132

Name: Solution Structure of human UBA-like domain of OTUD7A_11_83, NESG target HT6304a/OCSP target OTUD7A_11_83/SGC-Toronto
Published: 2010-09-02

Click here to enlarge.

PDB ID: 2l2d
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17132
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Solution Structure of human UBA-like domain of OTUD7A_11_83, NESG target HT6304a/OCSP target OTUD7A_11_83/SGC-Toronto

Deposition date:

2010-08-17

Original release date:

2010-09-02

Authors:

Wu, Bin; Yee, Adelinda; Lemak, Alexander; Gutmanas, Aleksandras; Houliston, Scott; Semesi, Anthony; Dhe-Paganon, Sirano; Arrowsmith, Cheryl

Citation:

Citation: Wu, Bin; Asinas, Abdalin; Yee, Adelinda; Doherty, Ryan; Lemak, Alexander; Gutmanas, Aleksandras; Houliston, Scott; Semesi, Anthony; Arrowsmith, Cheryl; Dhe-Paganon, Sirano. "The amino-terminal UBA domain of OTUD7A" .

Assembly members:

Assembly members:
OTUD7A_11_83, polymer, 73 residues, 8045.992 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET28-MHL

Entity Sequences (FASTA):

Entity Sequences (FASTA):
OTUD7A_11_83: SAECWAALLHDPMTLDMDAV LSDFVRSTGAEPGLARDLLE GKNWDLTAALSDYEQLRQVH TANLPHVFNEGRG

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1
spectral_peak_list

Data type	Count
13C chemical shifts	302
15N chemical shifts	73
1H chemical shifts	483

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	OTUD7A_11_83	1

Entities:

Entity 1, OTUD7A_11_83 73 residues - 8045.992 Da.

1

SER

ALA

GLU

CYS

TRP

ALA

LEU

HIS

2

ASP

PRO

MET

THR

LEU

ASP

MET

ASP

ALA

VAL

3

LEU

SER

ASP

PHE

VAL

ARG

SER

THR

GLY

ALA

4

GLU

PRO

GLY

LEU

ALA

ARG

ASP

LEU

GLU

5

GLY

LYS

ASN

TRP

ASP

LEU

THR

ALA

LEU

6

SER

ASP

TYR

GLU

GLN

LEU

ARG

GLN

VAL

HIS

7

THR

ALA

ASN

LEU

PRO

HIS

VAL

PHE

ASN

GLU

8

GLY

ARG

GLY

Name	Sample	Sample state	Sample conditions
3D HNCO	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D CCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aromatic	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1

PDB	2L2D
EMBL	CAD23047 CAD23048
GB	AAH35668 AAI69221 AAI72582 AHW56608 EDL07269
REF	NP_001193897 NP_570950 NP_570971 XP_001116351 XP_001492477
SP	Q8R554 Q8TE49
TPG	DAA17546
AlphaFold	Q8R554 Q8TE49

BMRB Entry 17132

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: