BMRB Entry 16921

Name: 1H, 13C, 15N chemical shifts for the bacterial cell division regulator MinE.
Published: 2010-07-26

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16921

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, 15N chemical shifts for the bacterial cell division regulator MinE.

Deposition date:

2010-05-11

Original release date:

2010-07-26

Authors:

Ducat, Thierry; Goto, Natalie

Citation:

Citation: Ducat, Thierry; Goto, Natalie. "1H, 13C, 15N chemical shift assignments for the Neisseria gonorrhoeae MinE regulator of cell division septum placement." Biomol. NMR Assignments 4, 227-229 (2010).
PubMed: 20623208

Assembly members:

Assembly members:
MinE, polymer, 95 residues, 11048 Da.

Natural source:

Natural source: Common Name: Neisseria gonorrhoeae Taxonomy ID: 485 Superkingdom: Bacteria Kingdom: not available Genus/species: Neisseria gonorrhoeae

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pEE46A

Entity Sequences (FASTA):

Entity Sequences (FASTA):
MinE: MSLIELLFGRKQKTATVARD RLQIIIAQERAQEGQTPDYL PTLRKALMEVLSKYVNVSLD NIRISQEKQDGMDVLELNIT LPEQKKVLEHHHHHH

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	377
15N chemical shifts	95
1H chemical shifts	640

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	MinE, chain 1	1
2	MinE, chain 2	1

Entities:

Entity 1, MinE, chain 1 95 residues - 11048 Da.

Two non-native residues (introduced from sub-cloning) plus 6 histidine residues (for purification) included at the C-terminus of the MinE sequence from N. gonorrhoeae.

1

MET

SER

LEU

ILE

GLU

LEU

PHE

GLY

ARG

2

LYS

GLN

LYS

THR

ALA

THR

VAL

ALA

ARG

ASP

3

ARG

LEU

GLN

ILE

ALA

GLN

GLU

ARG

4

ALA

GLN

GLU

GLY

GLN

THR

PRO

ASP

TYR

LEU

5

PRO

THR

LEU

ARG

LYS

ALA

LEU

MET

GLU

VAL

6

LEU

SER

LYS

TYR

VAL

ASN

VAL

SER

LEU

ASP

7

ASN

ILE

ARG

ILE

SER

GLN

GLU

LYS

GLN

ASP

8

GLY

MET

ASP

VAL

LEU

GLU

LEU

ASN

ILE

THR

9

LEU

PRO

GLU

GLN

LYS

VAL

LEU

GLU

HIS

10

HIS

Samples:

sample_1: MinE, [U-100% 13C; U-100% 15N], 0.8 – 1.0 mM; sodium chloride 45 mM; TRIS 22.5 mM; H2O 90%; D2O 10%

sample_2: MinE, [U-100% 13C; U-100% 15N], 0.6 mM; sodium chloride 50 mM; TRIS 25 mM; D2O 100%

sample_conditions_1: ionic strength: 0.045 M; pH: 7.2; pressure: 1 atm; temperature: 298 K

sample_conditions_2: ionic strength: 0.050 M; pH: 7.2; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HCCH-COSY	sample_2	isotropic	sample_conditions_2
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_2
3D 1H-15N TOCSY-HSQC	sample_1	isotropic	sample_conditions_1
3D CCH-TOCSY	sample_2	isotropic	sample_conditions_2
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_2

Software:

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMRView, Johnson, One Moon Scientific - chemical shift assignment, chemical shift calculation

NMR spectrometers:

Varian INOVA 500 MHz
Varian INOVA 500 MHz
Varian INOVA 800 MHz

PDB	2KXO
EMBL	CAM07417 CEZ97582 CFA84494 CFB79676 CFC32949
GB	AAK30127 AAW90432 ACF31058 AKP11296 AKP13283
REF	WP_002246740 WP_003690052 WP_003749826 YP_208844
SP	P58152 Q5F5V5 Q9JX18
AlphaFold	P58152 Q5F5V5 Q9JX18