BMRB Entry 16871

Name: Solution structure of the second PDZ domain from human zonula occludens-1: A dimeric form with 3D domain swapping
Published: 2011-05-05

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PDB ID: 2jwe
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16871
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the second PDZ domain from human zonula occludens-1: A dimeric form with 3D domain swapping

Deposition date:

2010-04-15

Original release date:

2011-05-05

Authors:

Ji, Peng; wu, Jiawen; Zhang, Jiahai; Yang, Yinshan; wu, Jihui; Shi, Yunyu

Citation:

Citation: Ji, Peng; Yang, Guang; Zhang, Jiahai; Wu, Jiawen; Chen, Zhengjun; Gong, Qingguo; Wu, Jihui; Shi, Yunyu. "Solution structure of the second PDZ domain of Zonula Occludens 1." Proteins 79, 1342-1346 (2011).
PubMed: 21387411

Assembly members:

Assembly members:
ZO-1 PDZ2, polymer, 88 residues, 2507.023 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET22b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ZO-1 PDZ2: TKVTLVKSRKNEEYGLRLAS HIFVKEISQDSLAARDGNIQ EGDVVLKINGTVTENMSLTD AKTLIERSKGKLKMVVQRDE LEHHHHHH

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	351
15N chemical shifts	88
1H chemical shifts	602

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ZO-1 PDZ2	1

Entities:

Entity 1, ZO-1 PDZ2 88 residues - 2507.023 Da.

1

THR

LYS

VAL

THR

LEU

VAL

LYS

SER

ARG

LYS

2

ASN

GLU

TYR

GLY

LEU

ARG

LEU

ALA

SER

3

HIS

ILE

PHE

VAL

LYS

GLU

ILE

SER

GLN

ASP

4

SER

LEU

ALA

ARG

ASP

GLY

ASN

ILE

GLN

5

GLU

GLY

ASP

VAL

LEU

LYS

ILE

ASN

GLY

6

THR

VAL

THR

GLU

ASN

MET

SER

LEU

THR

ASP

7

ALA

LYS

THR

LEU

ILE

GLU

ARG

SER

LYS

GLY

8

LYS

LEU

LYS

MET

VAL

GLN

ARG

ASP

GLU

9

LEU

GLU

HIS

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D HCCH-COSY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_2	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_3	isotropic	sample_conditions_1
2D 1H-1H 13C-Filtered NOESY	sample_3	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_4	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_4	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1

PDB	2JWE 2RCZ 3CYY
GB	EAW51509
REF	XP_004320454 XP_005193388 XP_009874121 XP_009922511 XP_010151333
TPG	DAA17568

BMRB Entry 16871

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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