BMRB Entry 16695

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16695

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Title:
Backbone Assignments for the HIV-1 Integrase Core Domain (residues 50-212)
Deposition date:
2010-01-29
Original release date:
2010-05-05
Authors:
Fitzkee, Nicholas; Masse, James; Shen, Yang; Davies, David; Bax, Ad
Citation:

Citation: Fitzkee, Nicholas; Masse, James; Shen, Yang; Davies, David; Bax, Ad. "Solution conformation and dynamics of the HIV-1 integrase core domain."  J. Biol. Chem. 285, 18072-18084 (2010).
PubMed: 20363759

Assembly members:

Assembly members:
Integrase_Core_Domain, polymer, 166 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: HIV   Taxonomy ID: 11676   Superkingdom: Viruses   Kingdom: not available   Genus/species: Lentivirus HIV-1

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET-15b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Integrase_Core_Domain: GSHMHGEVDSSPGIWQLDCT HLEGKVILVAVHVASGYIEA EVIPAETGQETAYFLLKLAG RWPVKTVHTDNGSNFTSTTV KAACEWAGIKQEFGIPYNPQ SQGVIESMNKELKKIIGQVR DQAEHLKTAVQMAVFIHNKK RKGGIGGYSAGERIVDIIAT DIETKE

Data sets:
Data typeCount
13C chemical shifts489
15N chemical shifts158
1H chemical shifts158

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1Integrase, chain 11
2Integrase, chain 21

Entities:

Entity 1, Integrase, chain 1 166 residues - Formula weight is not available

1   GLYSERHISMETHISGLYGLUVALASPSER
2   SERPROGLYILETRPGLNLEUASPCYSTHR
3   HISLEUGLUGLYLYSVALILELEUVALALA
4   VALHISVALALASERGLYTYRILEGLUALA
5   GLUVALILEPROALAGLUTHRGLYGLNGLU
6   THRALATYRPHELEULEULYSLEUALAGLY
7   ARGTRPPROVALLYSTHRVALHISTHRASP
8   ASNGLYSERASNPHETHRSERTHRTHRVAL
9   LYSALAALACYSGLUTRPALAGLYILELYS
10   GLNGLUPHEGLYILEPROTYRASNPROGLN
11   SERGLNGLYVALILEGLUSERMETASNLYS
12   GLULEULYSLYSILEILEGLYGLNVALARG
13   ASPGLNALAGLUHISLEULYSTHRALAVAL
14   GLNMETALAVALPHEILEHISASNLYSLYS
15   ARGLYSGLYGLYILEGLYGLYTYRSERALA
16   GLYGLUARGILEVALASPILEILEALATHR
17   ASPILEGLUTHRLYSGLU

Related Database Links:

PDB 1B92 1B9D 1BHL 1BIS 1BIU 1BIZ 1ITG 1QS4 2B4J 2ITG 3AO1 3AV9 3AVA 3AVB 3AVC 3AVF 3AVG 3AVH 3AVI 3AVJ 3AVK 3AVL 3AVM 3AVN 3L3U 3L3V 3NF6 3NF7 3NF8 3NF9 3NFA 3OVN 3VQ4 3VQ6 3VQ7 3VQA 3VQB 3VQC 3VQD 3VQP 3VQQ 3ZCM 3ZSO 3ZSQ 3ZSR 3ZSV 3ZSW 3ZSX 3ZSY 3ZSZ 3ZT0 3ZT1 3ZT2 3ZT3 3ZT4 4AH9 4AHR 4AHS 4AHT 4AHU 4AHV 4CE9 4CEA 4CEB 4CEC 4CED 4CEE 4CEF 4CEO 4CEQ 4CER 4CES 4CEZ 4CF0 4CF1 4CF2 4CF8 4CF9 4CFA 4CFB 4CFC 4CFD 4CGD 4CGF 4CGG 4CGH 4CGI 4CGJ 4CHN 4CHO 4CHP 4CHQ 4CHY 4CHZ 4CIE 4CIF 4CIG 4CJ3 4CJ4 4CJ5 4CJE 4CJF 4CJK 4CJL 4CJP 4CJQ 4CJR 4CJS 4CJT 4CJU 4CJV 4CJW 4CK1 4CK2 4CK3 4DMN 4GVM 4GW6 4OVL 4Y1C 4Y1D
GB ABO92709 AEM00300 AEM00302 AEM00305 AEM00307

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks