BMRB Entry 16678
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PDB ID: 2ksy
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16678
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Gautier, Antoine; Mott, Helen; Bostock, Mark; Kirkpatrick, John; Nietlispach, Daniel. "Structure determination of the seven-helix transmembrane receptor sensory rhodopsin II by solution NMR spectroscopy." Nat. Struct. Mol. Biol. 17, 768-774 (2010).
PubMed: 20512150
Assembly members:
Sensory Rhodopsin II, polymer, 247 residues, 26723.572 Da.
Natural source: Common Name: Natronomonas pharaonis Taxonomy ID: 2257 Superkingdom: Archaea Kingdom: not available Genus/species: Natronomonas pharaonis
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET28
Entity Sequences (FASTA):
Sensory Rhodopsin II: MVGLTTLFWLGAIGMLVGTL
AFAWAGRDAGSGERRYYVTL
VGISGIAAVAYAVMALGVGW
VPVAERTVFVPRYIDWILTT
PLIVYFLGLLAGLDSREFGI
VITLNTVVMLAGFAGAMVPG
IERYALFGMGAVAFIGLVYY
LVGPMTESASQRSSGIKSLY
VRLRNLTVVLWAIYPFIWLL
GPPGVALLTPTVDVALIVYL
DLVTXVGFGFIALDAAATLR
AEHGESLAGVDTDTPAVADL
EHHHHHH
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 1004 |
| 15N chemical shifts | 239 |
| 1H chemical shifts | 1530 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Sensory Rhodopsin II | 1 |
Entities:
Entity 1, Sensory Rhodopsin II 247 residues - 26723.572 Da.
| 1 | MET | VAL | GLY | LEU | THR | THR | LEU | PHE | TRP | LEU | ||||
| 2 | GLY | ALA | ILE | GLY | MET | LEU | VAL | GLY | THR | LEU | ||||
| 3 | ALA | PHE | ALA | TRP | ALA | GLY | ARG | ASP | ALA | GLY | ||||
| 4 | SER | GLY | GLU | ARG | ARG | TYR | TYR | VAL | THR | LEU | ||||
| 5 | VAL | GLY | ILE | SER | GLY | ILE | ALA | ALA | VAL | ALA | ||||
| 6 | TYR | ALA | VAL | MET | ALA | LEU | GLY | VAL | GLY | TRP | ||||
| 7 | VAL | PRO | VAL | ALA | GLU | ARG | THR | VAL | PHE | VAL | ||||
| 8 | PRO | ARG | TYR | ILE | ASP | TRP | ILE | LEU | THR | THR | ||||
| 9 | PRO | LEU | ILE | VAL | TYR | PHE | LEU | GLY | LEU | LEU | ||||
| 10 | ALA | GLY | LEU | ASP | SER | ARG | GLU | PHE | GLY | ILE | ||||
| 11 | VAL | ILE | THR | LEU | ASN | THR | VAL | VAL | MET | LEU | ||||
| 12 | ALA | GLY | PHE | ALA | GLY | ALA | MET | VAL | PRO | GLY | ||||
| 13 | ILE | GLU | ARG | TYR | ALA | LEU | PHE | GLY | MET | GLY | ||||
| 14 | ALA | VAL | ALA | PHE | ILE | GLY | LEU | VAL | TYR | TYR | ||||
| 15 | LEU | VAL | GLY | PRO | MET | THR | GLU | SER | ALA | SER | ||||
| 16 | GLN | ARG | SER | SER | GLY | ILE | LYS | SER | LEU | TYR | ||||
| 17 | VAL | ARG | LEU | ARG | ASN | LEU | THR | VAL | VAL | LEU | ||||
| 18 | TRP | ALA | ILE | TYR | PRO | PHE | ILE | TRP | LEU | LEU | ||||
| 19 | GLY | PRO | PRO | GLY | VAL | ALA | LEU | LEU | THR | PRO | ||||
| 20 | THR | VAL | ASP | VAL | ALA | LEU | ILE | VAL | TYR | LEU | ||||
| 21 | ASP | LEU | VAL | THR | LYR | VAL | GLY | PHE | GLY | PHE | ||||
| 22 | ILE | ALA | LEU | ASP | ALA | ALA | ALA | THR | LEU | ARG | ||||
| 23 | ALA | GLU | HIS | GLY | GLU | SER | LEU | ALA | GLY | VAL | ||||
| 24 | ASP | THR | ASP | THR | PRO | ALA | VAL | ALA | ASP | LEU | ||||
| 25 | GLU | HIS | HIS | HIS | HIS | HIS | HIS |
Related Database Links:
| PDB | 1GU8 1GUE 1H2S 1H68 1JGJ 2KSY 3QAP 3QDC |
| EMBL | CAA84469 CAI50508 |
| REF | WP_011324120 |
| SP | P42196 |
| AlphaFold | P42196 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks