BMRB Entry 16615

Name: Backbone assignment of E. coli HU protein
Published: 2012-08-03

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16615

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone assignment of E. coli HU protein

Deposition date:

2009-11-23

Original release date:

2012-08-03

Authors:

Augustyniak, Rafal; Castaing, Bertrand; Damblon, Christian

Citation:

Citation: Augustyniak, Rafal; Castaing, Bertrand; Damblon, Christian. "Backbone NMR assignment of E. coli HU proteins." .

Assembly members:

Assembly members:
HU_beta2, polymer, 90 residues, Formula weight is not available

Natural source:

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Eubacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pJES

Entity Sequences (FASTA):

Entity Sequences (FASTA):
HU_beta2: MNKSQLIDKIAAGADISKAA AGRALDAIIASVTESLKEGD DVALVGFGTFAVKERAARTG RNPQTGKEITIAAAKVPSFR AGKALKDAVN

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	239
15N chemical shifts	76
1H chemical shifts	76

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	HU-beta2, chain 1	1
2	HU-beta2, chain 2	1

Entities:

Entity 1, HU-beta2, chain 1 90 residues - Formula weight is not available

1	MET	ASN	LYS	SER	GLN	LEU	ILE	ASP	LYS	ILE
2	ALA	ALA	GLY	ALA	ASP	ILE	SER	LYS	ALA	ALA
3	ALA	GLY	ARG	ALA	LEU	ASP	ALA	ILE	ILE	ALA
4	SER	VAL	THR	GLU	SER	LEU	LYS	GLU	GLY	ASP
5	ASP	VAL	ALA	LEU	VAL	GLY	PHE	GLY	THR	PHE
6	ALA	VAL	LYS	GLU	ARG	ALA	ALA	ARG	THR	GLY
7	ARG	ASN	PRO	GLN	THR	GLY	LYS	GLU	ILE	THR
8	ILE	ALA	ALA	ALA	LYS	VAL	PRO	SER	PHE	ARG
9	ALA	GLY	LYS	ALA	LEU	LYS	ASP	ALA	VAL	ASN

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1

BMRB	25329
PDB	2O97 4P3V
DBJ	BAA11644 BAB33917 BAE76220 BAG75990 BAI23814
EMBL	CAA30692 CAA34539 CAD08910 CAP74974 CAQ30913
GB	AAB40196 AAC73543 AAG54790 AAL19406 AAN42041
PIR	AF0558
PRF	1410323A
REF	NP_308521 NP_414974 NP_455048 NP_459447 NP_706334
SP	P0A1R8 P0A1R9 P0ACF4 P0ACF5 P0ACF6
AlphaFold	P0A1R8 P0A1R9 P0ACF4 P0ACF5 P0ACF6

BMRB Entry 16615

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	ASN	LYS	SER	GLN	LEU	ILE	ASP	LYS	ILE
2	ALA	ALA	GLY	ALA	ASP	ILE	SER	LYS	ALA	ALA
3	ALA	GLY	ARG	ALA	LEU	ASP	ALA	ILE	ILE	ALA
4	SER	VAL	THR	GLU	SER	LEU	LYS	GLU	GLY	ASP
5	ASP	VAL	ALA	LEU	VAL	GLY	PHE	GLY	THR	PHE
6	ALA	VAL	LYS	GLU	ARG	ALA	ALA	ARG	THR	GLY
7	ARG	ASN	PRO	GLN	THR	GLY	LYS	GLU	ILE	THR
8	ILE	ALA	ALA	ALA	LYS	VAL	PRO	SER	PHE	ARG
9	ALA	GLY	LYS	ALA	LEU	LYS	ASP	ALA	VAL	ASN

1	MET	ASN	LYS	SER	GLN	LEU	ILE	ASP	LYS	ILE
2	ALA	ALA	GLY	ALA	ASP	ILE	SER	LYS	ALA	ALA
3	ALA	GLY	ARG	ALA	LEU	ASP	ALA	ILE	ILE	ALA
4	SER	VAL	THR	GLU	SER	LEU	LYS	GLU	GLY	ASP
5	ASP	VAL	ALA	LEU	VAL	GLY	PHE	GLY	THR	PHE
6	ALA	VAL	LYS	GLU	ARG	ALA	ALA	ARG	THR	GLY
7	ARG	ASN	PRO	GLN	THR	GLY	LYS	GLU	ILE	THR
8	ILE	ALA	ALA	ALA	LYS	VAL	PRO	SER	PHE	ARG
9	ALA	GLY	LYS	ALA	LEU	LYS	ASP	ALA	VAL	ASN

1	MET	ASN	LYS	SER	GLN	LEU	ILE	ASP	LYS	ILE
2	ALA	ALA	GLY	ALA	ASP	ILE	SER	LYS	ALA	ALA
3	ALA	GLY	ARG	ALA	LEU	ASP	ALA	ILE	ILE	ALA
4	SER	VAL	THR	GLU	SER	LEU	LYS	GLU	GLY	ASP
5	ASP	VAL	ALA	LEU	VAL	GLY	PHE	GLY	THR	PHE
6	ALA	VAL	LYS	GLU	ARG	ALA	ALA	ARG	THR	GLY
7	ARG	ASN	PRO	GLN	THR	GLY	LYS	GLU	ILE	THR
8	ILE	ALA	ALA	ALA	LYS	VAL	PRO	SER	PHE	ARG
9	ALA	GLY	LYS	ALA	LEU	LYS	ASP	ALA	VAL	ASN