BMRB Entry 16611
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR16611
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Citation: Naik, Mandar; Chang, Che-Chang; Naik, Nandita; Kung, Camy C-H; Shih, Hsiu-Ming; Huang, Tai-Huang. "NMR chemical shift assignments of a complex between SUMO-1 and SIM peptide derived from the C-terminus of Daxx." Biomol. NMR Assignments 5, 75-77 (2011).
PubMed: 20927612
Assembly members:
SUMO1, polymer, 97 residues, 11149.640 Da.
DAXX20, polymer, 20 residues, 2151.341 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGex-4T1
Entity Sequences (FASTA):
SUMO1: MSDQEAKPSTEDLGDKKEGE
YIKLKVIGQDSSEIHFKVKM
TTHLKKLKESYCQRQGVPMN
SLRFLFEGQRIADNHTPKEL
GMEEEDVIEVYQEQTGG
DAXX20: KTSVATQCDPEEIIVLSDSD
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 493 |
| 15N chemical shifts | 120 |
| 1H chemical shifts | 797 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | SUMO1 | 1 |
| 2 | DAXX20 | 2 |
Entities:
Entity 1, SUMO1 97 residues - 11149.640 Da.
Mature form of Small Ubiquitin like Modifier 1.
| 1 | MET | SER | ASP | GLN | GLU | ALA | LYS | PRO | SER | THR | ||||
| 2 | GLU | ASP | LEU | GLY | ASP | LYS | LYS | GLU | GLY | GLU | ||||
| 3 | TYR | ILE | LYS | LEU | LYS | VAL | ILE | GLY | GLN | ASP | ||||
| 4 | SER | SER | GLU | ILE | HIS | PHE | LYS | VAL | LYS | MET | ||||
| 5 | THR | THR | HIS | LEU | LYS | LYS | LEU | LYS | GLU | SER | ||||
| 6 | TYR | CYS | GLN | ARG | GLN | GLY | VAL | PRO | MET | ASN | ||||
| 7 | SER | LEU | ARG | PHE | LEU | PHE | GLU | GLY | GLN | ARG | ||||
| 8 | ILE | ALA | ASP | ASN | HIS | THR | PRO | LYS | GLU | LEU | ||||
| 9 | GLY | MET | GLU | GLU | GLU | ASP | VAL | ILE | GLU | VAL | ||||
| 10 | TYR | GLN | GLU | GLN | THR | GLY | GLY |
Entity 2, DAXX20 20 residues - 2151.341 Da.
Last 20 amino acids of the Death-associated protein -6 (Daxx), comprising one of the two SUMO Interacting Motif (SIM).
| 1 | LYS | THR | SER | VAL | ALA | THR | GLN | CYS | ASP | PRO | |
| 2 | GLU | GLU | ILE | ILE | VAL | LEU | SER | ASP | SER | ASP |
Related Database Links:
| BMRB | 17536 25299 |
| PDB | 1A5R 1TGZ 1WYW 1Y8R 1Z5S 2ASQ 2BF8 2G4D 2IO2 2IY0 2IY1 2KQS 2LAS 2MW5 2PE6 2UYZ 2VRR 3KYC 3KYD 3RZW 3UIP 4WJN 4WJO 4WJP 4WJQ |
| DBJ | BAB22172 BAB27379 BAB93477 BAC40739 BAE35024 BAA34295 BAB83524 BAD97124 BAE02344 BAE21895 |
| EMBL | CAA67898 CAG31129 CAG46944 CAG46953 CAH92616 CAE83918 CAG33366 CAH91194 |
| GB | AAB39999 AAB40388 AAB40390 AAC39959 AAC50733 AAB63043 AAB66585 AAB66586 AAB92671 AAC39853 |
| REF | NP_001005781 NP_001005782 NP_001009672 NP_001030535 NP_001106146 NP_001135441 NP_001135442 NP_001186662 NP_001241646 NP_001341 |
| SP | A7WLH8 P63165 P63166 Q2EF74 Q5E9D1 O18805 O35613 Q8VIB2 Q9UER7 |
| TPG | DAA32560 |
| AlphaFold | A7WLH8 P63165 P63166 Q2EF74 Q5E9D1 O18805 O35613 Q8VIB2 Q9UER7 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks