BMRB Entry 16228

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16228

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Title:
1H, 13C, and 15N chemical shift assignments for stereo-array labeled (SAIL) ubiquitin
Deposition date:
2009-03-27
Original release date:
2009-07-17
Authors:
Ikeya, Teppei; Takeda, Mitsuhiro; Yoshida, Hitoshi; Terauchi, Tsutomu; Jee, Jun-Goo; Kainosho, Masatsune; Guntert, Peter
Citation:

Citation: Ikeya, Teppei; Takeda, Mitsuhiro; Yoshida, Hitoshi; Terauchi, Tsutomu; Jee, Jun-Goo; Kainosho, Masatsune; Guntert, Peter. "Automated NMR structure determination of stereo-array isotope labeled ubiquitin from minimal sets of spectra using the SAIL-FLYA system"  J. Biomol. NMR. 44, 261-272 (2009).
PubMed: 19597942

Assembly members:

Assembly members:
ubiquitin, polymer, 76 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Chlorella vulgaris   Taxonomy ID: 3077   Superkingdom: Eukaryota   Kingdom: Viridiplantae   Genus/species: Chlorella vulgaris

Experimental source:

Experimental source:   Production method: cell free synthesis   Host organism: Escherichia coli   Vector: N.N.

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ubiquitin: MQIFVKTLTGKTITLEVESS DTIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLADYN IQKESTLHLVLRLRGG

Data sets:
Data typeCount
13C chemical shifts323
15N chemical shifts80
1H chemical shifts412

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1ubiquitin1

Entities:

Entity 1, ubiquitin 76 residues - Formula weight is not available

1   METGLNILEPHEVALLYSTHRLEUTHRGLY
2   LYSTHRILETHRLEUGLUVALGLUSERSER
3   ASPTHRILEGLUASNVALLYSALALYSILE
4   GLNASPLYSGLUGLYILEPROPROASPGLN
5   GLNARGLEUILEPHEALAGLYLYSGLNLEU
6   GLUASPGLYARGTHRLEUALAASPTYRASN
7   ILEGLNLYSGLUSERTHRLEUHISLEUVAL
8   LEUARGLEUARGGLYGLY

Related Database Links:

BMRB 15047 15410 15907 16582 16626 17181 17439 17769 17919 18582 18583 18584 18610 18611 18737 19406 19412 25070 25123 26604 4245 4375
PDB 1AAR 1CMX 1D3Z 1F9J 1FXT 1G6J 1GJZ 1NBF 1P3Q 1Q5W 1S1Q 1TBE 1UBI 1UBQ 1UZX 1V80 1V81 1WR6 1WRD 1XD3 1XQQ 1YD8 1YX5 1YX6 2AYO 2BGF 2C7M 2C7N 2D3G 2DEN 2DX5 2FID 2FIF 2FUH 2G45 2GMI 2HD5 2HTH 2IBI 2J7Q 2JF5 2JRI 2JY6 2JZZ 2K39 2K6D 2K8B 2K8C 2KDE 2KDF 2KHW 2KJH 2KLG 2KN5 2KOX 2KTF 2KWU 2KWV 2L0F 2L0T 2L3Z 2LD9 2LJ5 2LVO 2LVP 2LVQ 2LZ6 2MBB 2MBH 2MBO 2MBQ 2MCN 2MJ5 2MJB 2MOR 2MRE 2MRO 2MSG 2MUR 2N2K 2NR2 2O6V 2OJR 2OOB 2PE9 2PEA 2QHO 2RR9 2W9N 2WDT 2WWZ 2WX0 2WX1 2XBB 2XEW 2XK5 2Y5B 2Z59 2ZCC 2ZNV 2ZVN 2ZVO 3A1Q 3A33 3A9J 3A9K 3AI5 3ALB 3AUL 3AXC 3B08 3B0A 3BY4 3C0R 3DVG 3DVN 3EEC 3EFU 3EHV 3H1U 3H7P 3HM3 3I3T 3IFW 3IHP 3J60 3JSV 3JVZ 3JW0 3K9O 3K9P 3KVF 3KW5 3LDZ 3M3J 3MHS 3N30 3N32 3NHE 3NOB 3NS8 3O65 3OFI 3OJ3 3OJ4 3ONS 3PHD 3PHW 3PRM 3PRP 3PT2 3PTF 3Q3F 3RUL 3TBL 3TMP 3U30 3UGB 3VDZ 3VFK 3VHT 3VUW 3VUX 3VUY 3WWQ 3WXE 3WXF 3WXG 3ZNH 3ZNI 3ZNZ 4AP4 4AUQ 4BBN 4BOS 4BOZ 4BVU 4CXC 4CXD 4D5L 4D61 4DDG 4DDI 4DHJ 4DHZ 4FJV 4HXD 4I6N 4IG7 4IUM 4JQW 4K1R 4K7S 4K7U 4K7W 4KSK 4KSL 4KZX 4KZY 4KZZ 4LCD 4LDT 4LJO 4LJP 4M0W 4MDK 4MM3 4MSM 4MSQ 4NQK 4NQL 4P4H 4PQT 4R62 4RF0 4RF1 4S1Z 4S22 4UEL 4UF6 4UN2 4UPX 4UQ1 4UQ4 4UQ5 4V3K 4V3L 4W20 4W22 4W23 4W25 4W27 4W28 4WHV 4WLR 4WUR 4XKL 4XOF 4XOK 4XOL 4XYZ 4Y1H 4Z9S 4ZFR 4ZFT 5A5B 5AIT 5AIU
DBJ BAA02154 BAA03764 BAA03983 BAA05085 BAA05670
EMBL CAA10056 CAA11268 CAA11269 CAA25706 CAA28495
GB AAA19247 AAA28997 AAA28998 AAA28999 AAA29001
PIR G85036 I50437 I51568 I65237 JS0657
PRF 1101405A 1207189A 1212243A 1212243C 1212243J
REF NP_001005123 NP_001006688 NP_001009117 NP_001009286 NP_001013290
SP B9DHA6 P0C273 P0C275 P0C276 P0CG47
TPD FAA00319
TPE CAI56329
TPG DAA18802 DAA24675 DAA28295 DAA39608 DAA44269
AlphaFold B9DHA6 P0C273 P0C275 P0C276 P0CG47

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks