Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR15846
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Citation: Swapna, G. V. T.; Wang, Dongyan; Owens, Leah; Xiao, Rong; Liu, Jinfeng; Baran, Michael; Everett, John; Acton, Thomas; Rost, Burkhard; Montelione, Gaetano. "NMR solution Structure of Membrane associated protein from Bacillus cereus: Northeast Structural Genomics Consortium Target: BcR97A" .
Assembly members:
BcR97A, polymer, 105 residues, 12458.204 Da.
Natural source: Common Name: Bacillus cereus Taxonomy ID: 1396 Superkingdom: Bacteria Kingdom: not available Genus/species: Bacillus cereus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET 21-23C
Entity Sequences (FASTA):
BcR97A: MDLNRMGKDEYYVQITVDGK
EVHSKADNGQKYKDYEYKLT
GFDKDGKEKELEFTAQKNLR
KEAFLRVYHSDKKGVSAWEE
VKKDELPAKVKEKLGVKLEH
HHHHH
Data type | Count |
13C chemical shifts | 461 |
15N chemical shifts | 108 |
1H chemical shifts | 726 |
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | entity | 1 |
Entity 1, entity 105 residues - 12458.204 Da.
The sequence used to solve the structure is a construct (21-117aa) of the full length BcR97. The construct has been designed eliminating the first 20 residues based on the disorder-prediction algorithms. The residues 21-117 have been numbered as 1-97 in the current entry. The 8 residues at the C-terminal, LEHHHHHH correspond to the purification tag.
1 | MET | ASP | LEU | ASN | ARG | MET | GLY | LYS | ASP | GLU | ||||
2 | TYR | TYR | VAL | GLN | ILE | THR | VAL | ASP | GLY | LYS | ||||
3 | GLU | VAL | HIS | SER | LYS | ALA | ASP | ASN | GLY | GLN | ||||
4 | LYS | TYR | LYS | ASP | TYR | GLU | TYR | LYS | LEU | THR | ||||
5 | GLY | PHE | ASP | LYS | ASP | GLY | LYS | GLU | LYS | GLU | ||||
6 | LEU | GLU | PHE | THR | ALA | GLN | LYS | ASN | LEU | ARG | ||||
7 | LYS | GLU | ALA | PHE | LEU | ARG | VAL | TYR | HIS | SER | ||||
8 | ASP | LYS | LYS | GLY | VAL | SER | ALA | TRP | GLU | GLU | ||||
9 | VAL | LYS | LYS | ASP | GLU | LEU | PRO | ALA | LYS | VAL | ||||
10 | LYS | GLU | LYS | LEU | GLY | VAL | LYS | LEU | GLU | HIS | ||||
11 | HIS | HIS | HIS | HIS | HIS |
sample_1: BcR97A protein, [U-100% 13C; U-100% 15N], 1.25 ± 0.2 mM; DTT 10 mM; DSS 50 uM; NaN3 0.02%; CaCl2 5 mM; NaCl 100 uM; MES 20 mM; D2O, [U-2H], 10%; H2O 90%
sample_2: BcR97A protein, [U-10% 13C; U-100% 15N], 0.77 ± 0.2 mM; DTT 10 mM; DSS 50 uM; NaN3 0.02%; CaCl2 5 mM; NaCl 100 uM; MES 20 mM; D2O, [U-2H], 10%; H2O 90%
sample_conditions_1: ionic strength: 105 mM; pH: 6.5; pressure: 1 atm; temperature: 293 K
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
2D 1H-13C HSQC | sample_1 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D HBHA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D C(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HCCH-TOCSY | sample_1 | isotropic | sample_conditions_1 |
3D HCCH-COSY | sample_1 | isotropic | sample_conditions_1 |
3D 13C-edited_NOESY (arom) | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N NOESY | sample_1 | isotropic | sample_conditions_1 |
3D 13C-edited_NOESY (alpih) | sample_1 | isotropic | sample_conditions_1 |
2D 1H-15N HSQC | sample_2 | isotropic | sample_conditions_1 |
2D 1H-13C HSQC | sample_2 | isotropic | sample_conditions_1 |
2D 1H-15N HSQC (NH2 only) | sample_2 | isotropic | sample_conditions_1 |
AutoAssign v2.2.1, Zimmerman, Moseley, Kulikowski and Montelione - chemical shift assignment
AutoStruct v2.2.1, Huang, Tejero, Powers and Montelione - chemical shift assignment, structure solution
CYANA v2.1, Guntert, Mumenthaler and Wuthrich - geometry optimization, structure solution
CNS v2.0.6, Brunger, Adams, Clore, Gros, Nilges and Read - geometry optimization, refinement
PDB | |
DBJ | BAR81466 |
EMBL | CEX43735 CEY25430 CGF85445 CJA11551 CJA65307 |
GB | AAP11805 ADH09356 AEA18648 AFV20811 AGG03783 |
REF | NP_834604 WP_000833148 WP_000833150 WP_000833151 WP_000833152 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks