BMRB Entry 15664

Name: 1H, 13C, and 15N chemical shift assignments of the C-terminal domain of the protein YqiJ from Escherichia coli
Published: 2009-06-10

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15664

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C, and 15N chemical shift assignments of the C-terminal domain of the protein YqiJ from Escherichia coli

Deposition date:

2008-02-19

Original release date:

2009-06-10

Authors:

Moller, Heiko; Drees, Christina; Hinderhofer, Markus; Boos, Winfried

Citation:

Citation: Hinderhofer, Markus; Walker, Christina; Friemel, Anke; Stuermer, Heiko; Reuter, Alexander. "Evolution of prokaryotic SPFH proteins." BMC Evol. Biol. 9, 10-10 (2009).
PubMed: 19138386

Assembly members:

Assembly members:
YqiJ, polymer, 100 residues, 11089.6 Da.

Natural source:

Natural source: Common Name: not available Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pHIHO1422

Entity Sequences (FASTA):

Entity Sequences (FASTA):
YqiJ: GSHMLEDPTGKIVAPWIPRD HSSAITEEEYIGSMALITGH QATSGNPCEGKLTDQFGQIH YLLLEPEEGKIFTKGDKVLI ICRLSATRYLAENNPWPQIL

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	436
15N chemical shifts	91
1H chemical shifts	643

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	YqiJ	1

Entities:

Entity 1, YqiJ 100 residues - 11089.6 Da.

1	GLY	SER	HIS	MET	LEU	GLU	ASP	PRO	THR	GLY
2	LYS	ILE	VAL	ALA	PRO	TRP	ILE	PRO	ARG	ASP
3	HIS	SER	SER	ALA	ILE	THR	GLU	GLU	GLU	TYR
4	ILE	GLY	SER	MET	ALA	LEU	ILE	THR	GLY	HIS
5	GLN	ALA	THR	SER	GLY	ASN	PRO	CYS	GLU	GLY
6	LYS	LEU	THR	ASP	GLN	PHE	GLY	GLN	ILE	HIS
7	TYR	LEU	LEU	LEU	GLU	PRO	GLU	GLU	GLY	LYS
8	ILE	PHE	THR	LYS	GLY	ASP	LYS	VAL	LEU	ILE
9	ILE	CYS	ARG	LEU	SER	ALA	THR	ARG	TYR	LEU
10	ALA	GLU	ASN	ASN	PRO	TRP	PRO	GLN	ILE	LEU

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_3	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_3	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_3	isotropic	sample_conditions_1
3D HCCH-COSY	sample_2	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D (H)CCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D 1H-13C-NOESY	sample_2	isotropic	sample_conditions_1
(HB)CB(CGCDCE)HE	sample_2	isotropic	sample_conditions_1
(HB)CB(CGCD)HD	sample_2	isotropic	sample_conditions_1
2D 1H-13C HSQC aromatic	sample_2	isotropic	sample_conditions_1
3D 1H-13C-NOESY aromatic	sample_2	isotropic	sample_conditions_1

DBJ	BAB37355 BAE77102 BAG78853 BAI27332 BAI32447
EMBL	CAQ33387 CAR00011 CAR14688 CAR19662 CAU99595
GB	AAC76086 AAG58184 AAZ89770 ABG71122 ABV07459
REF	NP_311959 NP_417522 WP_000016376 WP_000599922 WP_000599923
SP	P76657
AlphaFold	P76657

BMRB Entry 15664

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	HIS	MET	LEU	GLU	ASP	PRO	THR	GLY
2	LYS	ILE	VAL	ALA	PRO	TRP	ILE	PRO	ARG	ASP
3	HIS	SER	SER	ALA	ILE	THR	GLU	GLU	GLU	TYR
4	ILE	GLY	SER	MET	ALA	LEU	ILE	THR	GLY	HIS
5	GLN	ALA	THR	SER	GLY	ASN	PRO	CYS	GLU	GLY
6	LYS	LEU	THR	ASP	GLN	PHE	GLY	GLN	ILE	HIS
7	TYR	LEU	LEU	LEU	GLU	PRO	GLU	GLU	GLY	LYS
8	ILE	PHE	THR	LYS	GLY	ASP	LYS	VAL	LEU	ILE
9	ILE	CYS	ARG	LEU	SER	ALA	THR	ARG	TYR	LEU
10	ALA	GLU	ASN	ASN	PRO	TRP	PRO	GLN	ILE	LEU

1	GLY	SER	HIS	MET	LEU	GLU	ASP	PRO	THR	GLY
2	LYS	ILE	VAL	ALA	PRO	TRP	ILE	PRO	ARG	ASP
3	HIS	SER	SER	ALA	ILE	THR	GLU	GLU	GLU	TYR
4	ILE	GLY	SER	MET	ALA	LEU	ILE	THR	GLY	HIS
5	GLN	ALA	THR	SER	GLY	ASN	PRO	CYS	GLU	GLY
6	LYS	LEU	THR	ASP	GLN	PHE	GLY	GLN	ILE	HIS
7	TYR	LEU	LEU	LEU	GLU	PRO	GLU	GLU	GLY	LYS
8	ILE	PHE	THR	LYS	GLY	ASP	LYS	VAL	LEU	ILE
9	ILE	CYS	ARG	LEU	SER	ALA	THR	ARG	TYR	LEU
10	ALA	GLU	ASN	ASN	PRO	TRP	PRO	GLN	ILE	LEU

1	GLY	SER	HIS	MET	LEU	GLU	ASP	PRO	THR	GLY
2	LYS	ILE	VAL	ALA	PRO	TRP	ILE	PRO	ARG	ASP
3	HIS	SER	SER	ALA	ILE	THR	GLU	GLU	GLU	TYR
4	ILE	GLY	SER	MET	ALA	LEU	ILE	THR	GLY	HIS
5	GLN	ALA	THR	SER	GLY	ASN	PRO	CYS	GLU	GLY
6	LYS	LEU	THR	ASP	GLN	PHE	GLY	GLN	ILE	HIS
7	TYR	LEU	LEU	LEU	GLU	PRO	GLU	GLU	GLY	LYS
8	ILE	PHE	THR	LYS	GLY	ASP	LYS	VAL	LEU	ILE
9	ILE	CYS	ARG	LEU	SER	ALA	THR	ARG	TYR	LEU
10	ALA	GLU	ASN	ASN	PRO	TRP	PRO	GLN	ILE	LEU