BMRB Entry 15430

Name: The chemical shift assignment of gamma subunit of phosphodiesterase
Published: 2007-08-20

Click here to enlarge.

PDB ID: 2ju4
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15430
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

The chemical shift assignment of gamma subunit of phosphodiesterase

Deposition date:

2007-08-14

Original release date:

2007-08-20

Authors:

Song, Jikui; Guo, Lian-Wang; Ruoho, Arnold; Markley, John

Citation:

Citation: Song, Jikui; Guo, Lian-Wang; Muradov, Hakim; Artemyev, Nikolai; Ruoho, Arnold; Markley, John. "Intrinsically disordered gamma-subunit of cGMP phosphodiesterase encodes functionally relevant transient secondary and tertiary structure" Proc. Natl. Acad. Sci. U. S. A. 105, 1505-1510 (2008).
PubMed: 18230733

Assembly members:

Assembly members:
PDEgamma, polymer, 87 residues, 13286.163 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pTXBI

Entity Sequences (FASTA):

Entity Sequences (FASTA):
PDEgamma: MNLEPPKAEIRSATRVMGGP VTPRKGPPKFKQRQTRQFKS KPPKKGVQGFGDDIPGMEGL GTDITVIAPWEAFNHLELHE LAQYGII

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	325
15N chemical shifts	77
1H chemical shifts	443

Time Domain Data

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	PDEgamma	1

Entities:

Entity 1, PDEgamma 87 residues - 13286.163 Da.

1

MET

ASN

LEU

GLU

PRO

LYS

ALA

GLU

ILE

2

ARG

SER

ALA

THR

ARG

VAL

MET

GLY

PRO

3

VAL

THR

PRO

ARG

LYS

GLY

PRO

LYS

PHE

4

LYS

GLN

ARG

GLN

THR

ARG

GLN

PHE

LYS

SER

5

LYS

PRO

LYS

GLY

VAL

GLN

GLY

PHE

6

GLY

ASP

ILE

PRO

GLY

MET

GLU

GLY

LEU

7

GLY

THR

ASP

ILE

THR

VAL

ILE

ALA

PRO

TRP

8

GLU

ALA

PHE

ASN

HIS

LEU

GLU

LEU

HIS

GLU

9

LEU

ALA

GLN

TYR

GLY

ILE

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_2	isotropic	sample_conditions_1
3D HNCACB	sample_2	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_2	isotropic	sample_conditions_1
3D H(CCO)NH	sample_2	isotropic	sample_conditions_1
3D C(CO)NH	sample_2	isotropic	sample_conditions_1
3D HNCO	sample_2	isotropic	sample_conditions_1
3D HNHA	sample_2	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_3	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_4	isotropic	sample_conditions_1

EMBL	CAA27821 CAA28507 CAA93815 CAD10146
GB	AAA61950 AAB00116 AAB40379 EDM06834 EDM06835
PRF	1212259A
REF	NP_001003235 NP_776846 XP_001081804 XP_001081805 XP_001488767
SP	P04972 P54827 P61248
TPG	DAA18226
AlphaFold	P04972 P54827 P61248

BMRB Entry 15430

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: