BMRB Entry 15374

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PDB ID: 2ql0
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR15374
MolProbity Validation Chart

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Title:
Zinc substitued Rubredoxin from Desulfovibrio Vulgaris
Deposition date:
2007-07-12
Original release date:
2009-06-29
Authors:
Goodfellow, Brian; Duarte, Iven; Moura, Jose; Volkman, Brian; Nunes, Sofia; Moura, Isabel; Markley, John; Macedo, Anjos
Citation:

Citation: Goodfellow, Brian; Duarte, Iven; Macedo, Anjos; Volkman, Brian; Nunes, Sofia; Moura, I.; Markley, John; Moura, Jose. "An NMR structural study of nickel-substituted rubredoxin."  J. Biol. Inorg. Chem. 15, 409-420 (2010).
PubMed: 19997764

Assembly members:

Assembly members:
rubredoxin, polymer, 52 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.

Natural source:

Natural source:   Common Name: desulfovibrio vulgaris   Taxonomy ID: 881   Superkingdom: Bacteria   Kingdom: not available   Genus/species: desulfovibrio vulgaris

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: PT7-7

Entity Sequences (FASTA):

Entity Sequences (FASTA):
rubredoxin: MKKYVCTVCGYEYDPAEGDP DNGVKPGTSFDDLPADWVCP VCGAPKSEFEAA

Data sets:
Data typeCount
15N chemical shifts44
1H chemical shifts313

Additional metadata:

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Assembly:

Entity Assembly IDEntity NameEntity ID
1rubredoxin1
2Zinc ion2

Entities:

Entity 1, rubredoxin 52 residues - Formula weight is not available

1   METLYSLYSTYRVALCYSTHRVALCYSGLY
2   TYRGLUTYRASPPROALAGLUGLYASPPRO
3   ASPASNGLYVALLYSPROGLYTHRSERPHE
4   ASPASPLEUPROALAASPTRPVALCYSPRO
5   VALCYSGLYALAPROLYSSERGLUPHEGLU
6   ALAALA

Entity 2, Zinc ion - Zn - 65.409 Da.

1   ZN

Related Database Links:

BMRB 15375 16849
PDB 1RB9 2KKD 2QL0 7RXN 8RXN
GB AAA21088 AAA23381 AAA64798 AAS97654 ABM27227
REF WP_010940442 YP_012394
SP P00269
AlphaFold P00269

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SPARKY: Backbone or all simulated peaks