BMRB Entry 15039

Name: solution structure of ta0956
Published: 2007-10-16

Click here to enlarge.

PDB ID: 2jmk
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15039
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

solution structure of ta0956

Deposition date:

2006-11-20

Original release date:

2007-10-16

Authors:

Koo, Bon-Kyung; Jung, Jinwon; Jung, Hyunseob; Nam, Hyung Wook; Kim, Yu Sam; Yee, Adelinda; Arrowsmith, Cheryl; Lee, Weontae

Citation:

Citation: Koo, Bon-Kyung; Jung, Jinwon; Jung, Hyunseob; Nam, Hyung Wook; Kim, Yu Sam; Yee, Adelinda; Lee, Weontae. "Solution structure of the hypothetical novel-fold protein TA0956 from Thermoplasma acidophilum" Proteins 69, 444-447 (2007).
PubMed: 17634985

Assembly members:

Assembly members:
ta0956, polymer, 110 residues, 12574.589 Da.

Natural source:

Natural source: Common Name: Thermoplasma acidophilum Taxonomy ID: 2303 Superkingdom: Archaea Kingdom: not available Genus/species: Thermoplasma acidophilum

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET15b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ta0956: MTLCAMYNISMAGSHPTTIC VVMDRFLESFSELYDIIDEN DTDVMMDFISRFARTDEIMP EDKTVGFVVVNADKKLMSVS FSDIDENMKKVIKATAEKFK NKGFKVETDM

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	303
15N chemical shifts	110
1H chemical shifts	695

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	TA0956	1

Entities:

Entity 1, TA0956 110 residues - 12574.589 Da.

1	MET	THR	LEU	CYS	ALA	MET	TYR	ASN	ILE	SER
2	MET	ALA	GLY	SER	HIS	PRO	THR	THR	ILE	CYS
3	VAL	VAL	MET	ASP	ARG	PHE	LEU	GLU	SER	PHE
4	SER	GLU	LEU	TYR	ASP	ILE	ILE	ASP	GLU	ASN
5	ASP	THR	ASP	VAL	MET	MET	ASP	PHE	ILE	SER
6	ARG	PHE	ALA	ARG	THR	ASP	GLU	ILE	MET	PRO
7	GLU	ASP	LYS	THR	VAL	GLY	PHE	VAL	VAL	VAL
8	ASN	ALA	ASP	LYS	LYS	LEU	MET	SER	VAL	SER
9	PHE	SER	ASP	ILE	ASP	GLU	ASN	MET	LYS	LYS
10	VAL	ILE	LYS	ALA	THR	ALA	GLU	LYS	PHE	LYS
11	ASN	LYS	GLY	PHE	LYS	VAL	GLU	THR	ASP	MET

Name	Sample	Sample state	Sample conditions
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_2	isotropic	sample_conditions_1

BMRB	15688
PDB	2JMK 2K24
EMBL	CAC12085
REF	WP_010901367

BMRB Entry 15039

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	THR	LEU	CYS	ALA	MET	TYR	ASN	ILE	SER
2	MET	ALA	GLY	SER	HIS	PRO	THR	THR	ILE	CYS
3	VAL	VAL	MET	ASP	ARG	PHE	LEU	GLU	SER	PHE
4	SER	GLU	LEU	TYR	ASP	ILE	ILE	ASP	GLU	ASN
5	ASP	THR	ASP	VAL	MET	MET	ASP	PHE	ILE	SER
6	ARG	PHE	ALA	ARG	THR	ASP	GLU	ILE	MET	PRO
7	GLU	ASP	LYS	THR	VAL	GLY	PHE	VAL	VAL	VAL
8	ASN	ALA	ASP	LYS	LYS	LEU	MET	SER	VAL	SER
9	PHE	SER	ASP	ILE	ASP	GLU	ASN	MET	LYS	LYS
10	VAL	ILE	LYS	ALA	THR	ALA	GLU	LYS	PHE	LYS
11	ASN	LYS	GLY	PHE	LYS	VAL	GLU	THR	ASP	MET

1	MET	THR	LEU	CYS	ALA	MET	TYR	ASN	ILE	SER
2	MET	ALA	GLY	SER	HIS	PRO	THR	THR	ILE	CYS
3	VAL	VAL	MET	ASP	ARG	PHE	LEU	GLU	SER	PHE
4	SER	GLU	LEU	TYR	ASP	ILE	ILE	ASP	GLU	ASN
5	ASP	THR	ASP	VAL	MET	MET	ASP	PHE	ILE	SER
6	ARG	PHE	ALA	ARG	THR	ASP	GLU	ILE	MET	PRO
7	GLU	ASP	LYS	THR	VAL	GLY	PHE	VAL	VAL	VAL
8	ASN	ALA	ASP	LYS	LYS	LEU	MET	SER	VAL	SER
9	PHE	SER	ASP	ILE	ASP	GLU	ASN	MET	LYS	LYS
10	VAL	ILE	LYS	ALA	THR	ALA	GLU	LYS	PHE	LYS
11	ASN	LYS	GLY	PHE	LYS	VAL	GLU	THR	ASP	MET

1	MET	THR	LEU	CYS	ALA	MET	TYR	ASN	ILE	SER
2	MET	ALA	GLY	SER	HIS	PRO	THR	THR	ILE	CYS
3	VAL	VAL	MET	ASP	ARG	PHE	LEU	GLU	SER	PHE
4	SER	GLU	LEU	TYR	ASP	ILE	ILE	ASP	GLU	ASN
5	ASP	THR	ASP	VAL	MET	MET	ASP	PHE	ILE	SER
6	ARG	PHE	ALA	ARG	THR	ASP	GLU	ILE	MET	PRO
7	GLU	ASP	LYS	THR	VAL	GLY	PHE	VAL	VAL	VAL
8	ASN	ALA	ASP	LYS	LYS	LEU	MET	SER	VAL	SER
9	PHE	SER	ASP	ILE	ASP	GLU	ASN	MET	LYS	LYS
10	VAL	ILE	LYS	ALA	THR	ALA	GLU	LYS	PHE	LYS
11	ASN	LYS	GLY	PHE	LYS	VAL	GLU	THR	ASP	MET