BMRB Entry 11534

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PDB ID: 2rtx
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11534
MolProbity Validation Chart

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Title:
Solution structure of the GGQ domain of YaeJ protein from Escherichia coli
Deposition date:
2013-09-21
Original release date:
2013-12-23
Authors:
Nameki, Nobukazu; Enomoto, Mayu; Kogure, Hiroyuki; Tochio, Naoya; Guntert, Peter
Citation:

Citation: Kogure, Hiroyuki; Nameki, Nobukazu. "Identification of residues required for stalled-ribosome rescue in the codon-independent release factor YaeJ"  Nucleic Acids Res. ., .-. (2013).
PubMed: 24322300

Assembly members:

Assembly members:
entity, polymer, 121 residues, 13473.514 Da.

Natural source:

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Eubacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:

Experimental source:   Production method: cell free synthesis   Host organism: Escherichia coli   Vector: not applicable

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: MIVISRHVAIPDGELEITAI RAQGAGGQHVNKTSTAIHLR FDIRASSLPEYYKERLLAAS HHLISSDGVIVIKAQEYRSQ ELNREAALARLVAMIKELTT EKKARRPTRSGPSSGENLYF Q

Data sets:
Data typeCount
13C chemical shifts536
15N chemical shifts123
1H chemical shifts864

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1the GGQ domain of YaeJ protein1

Entities:

Entity 1, the GGQ domain of YaeJ protein 121 residues - 13473.514 Da.

Residues 110-121 represent a non-native affinity tag.

1   METILEVALILESERARGHISVALALAILE
2   PROASPGLYGLULEUGLUILETHRALAILE
3   ARGALAGLNGLYALAGLYGLYGLNHISVAL
4   ASNLYSTHRSERTHRALAILEHISLEUARG
5   PHEASPILEARGALASERSERLEUPROGLU
6   TYRTYRLYSGLUARGLEULEUALAALASER
7   HISHISLEUILESERSERASPGLYVALILE
8   VALILELYSALAGLNGLUTYRARGSERGLN
9   GLULEUASNARGGLUALAALALEUALAARG
10   LEUVALALAMETILELYSGLULEUTHRTHR
11   GLULYSLYSALAARGARGPROTHRARGSER
12   GLYPROSERSERGLYGLUASNLEUTYRPHE
13   GLN

Related Database Links:

PDB 2RTX
DBJ BAI29068
EMBL CSE40362 CSE41074 CSE45877 CSE47218 CSE48511
GB EFZ51677 EGX13540 EIQ48412 EIQ48742 EIQ55363
REF WP_000635548

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