BMRB Entry 11443

Name: Crystal structure of the UBA domain of p62 and its interaction with ubiquitin
Published: 2011-07-05

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PDB ID: 2rru
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR11443
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Crystal structure of the UBA domain of p62 and its interaction with ubiquitin

Deposition date:

2011-06-09

Original release date:

2011-07-05

Authors:

Isogai, Shin; Morimoto, Daichi; Arita, Kyouhei; Unzai, Satoru; Tenno, Takeshi; Hasegawa, Jun; Sou, Yu-shin; Komatsu, Masaaki; Tanaka, Keiji; Shirakawa, Masahiro; Tochio, Hidehito

Citation:

Citation: Isogai, Shin; Morimoto, Daichi; Arita, Kyouhei; Unzai, Satoru; Tenno, Takeshi; Sou, Yu-shin; Komatsu, Masaaki; Tanaka, Keiji; Shirakawa, Masahiro; Tochio, Hidehito. "Crystal structure of the UBA domain of p62 and its interaction with ubiquitin" To be Published ., .-..

Assembly members:

Assembly members:
P62/SEQUESTOSOME-1, polymer, 53 residues, 5817.546 Da.

Natural source:

Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: PGEX-6P1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
P62/SEQUESTOSOME-1: GPLGSEADPRLIESLSQMLS MGFSDEGGWLTRLLQTKNYD IGAALDTIQYSKH

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	219
15N chemical shifts	51
1H chemical shifts	356

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	P62/SEQUESTOSOME-1	1

Entities:

Entity 1, P62/SEQUESTOSOME-1 53 residues - 5817.546 Da.

Expression Tag sequence GPLGS

1

GLY

PRO

LEU

GLY

SER

GLU

ALA

ASP

PRO

ARG

2

LEU

ILE

GLU

SER

LEU

SER

GLN

MET

LEU

SER

3

MET

GLY

PHE

SER

ASP

GLU

GLY

TRP

LEU

4

THR

ARG

LEU

GLN

THR

LYS

ASN

TYR

ASP

5

ILE

GLY

ALA

LEU

ASP

THR

ILE

GLN

TYR

6

SER

LYS

HIS

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)N 3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1

BMRB	11149 15591 15592
PDB	1Q02 2JY7 2JY8 2K0B 2KNV 2RRU 3B0F
DBJ	BAC26183
GB	AAH06019 AKI70216 EDL33719 EHH27114 EHH54825
REF	NP_001277698 XP_006246276 XP_006246277 XP_008273207 XP_008987787

BMRB Entry 11443

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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